RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 REM1O75628 298 aa18.83■□□□□ 0.61
VCPKMT-202ENST00000395860 CAPNS1P04632 268 aa18.83■□□□□ 0.61
VCPKMT-202ENST00000395860 NID1P14543 1247 aa18.83■□□□□ 0.61
VCPKMT-202ENST00000395860 ATP12AP54707 1039 aa18.83■□□□□ 0.61
VCPKMT-202ENST00000395860 NRG3P56975 720 aa18.83■□□□□ 0.61
VCPKMT-202ENST00000395860 PDZK1Q5T2W1 519 aa18.83■□□□□ 0.61
VCPKMT-202ENST00000395860 PLAG1Q6DJT9 500 aa18.83■□□□□ 0.61
VCPKMT-202ENST00000395860 DEF8Q6ZN54 512 aa18.83■□□□□ 0.61
VCPKMT-202ENST00000395860 LACC1Q8IV20 430 aa18.83■□□□□ 0.61
VCPKMT-202ENST00000395860 CLIP4Q8N3C7 705 aa18.83■□□□□ 0.61
VCPKMT-202ENST00000395860 OR4D11Q8NGI4 311 aa18.83■□□□□ 0.61
VCPKMT-202ENST00000395860 ELP5Q8TE02 316 aa18.83■□□□□ 0.61
VCPKMT-202ENST00000395860 DEFB126Q9BYW3 111 aa18.83■□□□□ 0.61
VCPKMT-202ENST00000395860 ARMC7Q9H6L4 198 aa18.83■□□□□ 0.61
VCPKMT-202ENST00000395860 DTNAQ9Y4J8 743 aa18.83■□□□□ 0.61
VCPKMT-202ENST00000395860 CLDN24A6NM45 220 aa18.83■□□□□ 0.6
VCPKMT-202ENST00000395860 PEX1O43933 1283 aa18.83■□□□□ 0.6
VCPKMT-202ENST00000395860 E2F6O75461 281 aa18.83■□□□□ 0.6
VCPKMT-202ENST00000395860 SDHBP21912 280 aa18.83■□□□□ 0.6
VCPKMT-202ENST00000395860 EEF1A1P68104 462 aaKnown RBP18.83■□□□□ 0.6
VCPKMT-202ENST00000395860 ZNF141Q15928 474 aa18.83■□□□□ 0.6
VCPKMT-202ENST00000395860 NRF1Q16656 503 aa18.83■□□□□ 0.6
VCPKMT-202ENST00000395860 M1APQ8TC57 530 aa18.83■□□□□ 0.6
VCPKMT-202ENST00000395860 NACC2Q96BF6 587 aa18.83■□□□□ 0.6
VCPKMT-202ENST00000395860 OMA1Q96E52 524 aa18.83■□□□□ 0.6
VCPKMT-202ENST00000395860 ADOQ96SZ5 270 aa18.83■□□□□ 0.6
VCPKMT-202ENST00000395860 ARHGDIGQ99819 225 aa18.83■□□□□ 0.6
VCPKMT-202ENST00000395860 WFDC6Q9BQY6 131 aa18.83■□□□□ 0.6
VCPKMT-202ENST00000395860 C9orf16Q9BUW7 83 aa18.83■□□□□ 0.6
VCPKMT-202ENST00000395860 HOXD1Q9GZZ0 328 aa18.83■□□□□ 0.6
VCPKMT-202ENST00000395860 REEP1Q9H902 201 aa18.83■□□□□ 0.6
VCPKMT-202ENST00000395860 ZNF160Q9HCG1 818 aa18.83■□□□□ 0.6
VCPKMT-202ENST00000395860 RLIMQ9NVW2 624 aa18.83■□□□□ 0.6
VCPKMT-202ENST00000395860 U3KQV3 271 aa18.83■□□□□ 0.6
VCPKMT-202ENST00000395860 EXPH5Q8NEV8 1989 aa18.82■□□□□ 0.6
VCPKMT-202ENST00000395860 NPIPB9F8W1W9 429 aa18.82■□□□□ 0.6
VCPKMT-202ENST00000395860 J3KTA2 159 aa18.82■□□□□ 0.6
VCPKMT-202ENST00000395860 ADAMDEC1O15204 470 aa18.82■□□□□ 0.6
VCPKMT-202ENST00000395860 DNAJB5O75953 348 aa18.82■□□□□ 0.6
VCPKMT-202ENST00000395860 RHCEP18577 417 aa18.82■□□□□ 0.6
VCPKMT-202ENST00000395860 ABCD3P28288 659 aa18.82■□□□□ 0.6
VCPKMT-202ENST00000395860 RRM2P31350 389 aa18.82■□□□□ 0.6
VCPKMT-202ENST00000395860 IST1P53990 364 aa18.82■□□□□ 0.6
VCPKMT-202ENST00000395860 MRPL2Q5T653 305 aaKnown RBP18.82■□□□□ 0.6
VCPKMT-202ENST00000395860 RNF220Q5VTB9 566 aa18.82■□□□□ 0.6
VCPKMT-202ENST00000395860 ZBTB49Q6ZSB9 765 aa18.82■□□□□ 0.6
VCPKMT-202ENST00000395860 CYP4Z1Q86W10 505 aa18.82■□□□□ 0.6
VCPKMT-202ENST00000395860 RBM45Q8IUH3 476 aaKnown RBP18.82■□□□□ 0.6
VCPKMT-202ENST00000395860 EPHX4Q8IUS5 362 aa18.82■□□□□ 0.6
VCPKMT-202ENST00000395860 VCXQ9H320 206 aa18.82■□□□□ 0.6
VCPKMT-202ENST00000395860 COQ10BQ9H8M1 238 aa18.82■□□□□ 0.6
VCPKMT-202ENST00000395860 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.82■□□□□ 0.6
VCPKMT-202ENST00000395860 TESMINQ9Y4I5 508 aa18.82■□□□□ 0.6
VCPKMT-202ENST00000395860 PCDHGA6Q9Y5G7 932 aa18.82■□□□□ 0.6
VCPKMT-202ENST00000395860 MRPS18BQ9Y676 258 aaKnown RBP18.82■□□□□ 0.6
VCPKMT-202ENST00000395860 AK5Q9Y6K8 562 aa18.82■□□□□ 0.6
VCPKMT-202ENST00000395860 WWP2O00308 870 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 DPM1O60762 260 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 RNF144AP50876 292 aaPredicted RBP18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 SPIBQ01892 262 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 PPP1R8Q12972 351 aaKnown RBP18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 C16orf47Q6ZP98 133 aaPredicted RBP18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 DTX1Q86Y01 620 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 RAB43Q86YS6 212 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 TAGAPQ8N103 731 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 OR6T1Q8NGN1 323 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 OR4C3Q8NH37 302 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 OR5K1Q8NHB7 308 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 SDCCAG3Q96C92 435 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 PIP5K1AQ99755 562 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 MMP25Q9NPA2 562 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 UBQLN4Q9NRR5 601 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 VNN3Q9NY84 501 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 SAMHD1Q9Y3Z3 626 aaKnown RBP18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 CNOT1A5YKK6 2376 aaKnown RBP18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 G3V2T6 193 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 PDLIM1O00151 329 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 FRS3O43559 492 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 HS6ST1O60243 411 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 TSPAN2O60636 221 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 DXOO77932 396 aaKnown RBP18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 CELA2AP08217 269 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 HPGDP15428 266 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 LCN1P31025 176 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 PNLIPRP2P54317 469 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 RGS8P57771 180 aaPredicted RBP18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 IL10RAQ13651 578 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 FGFBP1Q14512 234 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 GANABQ14697 944 aaKnown RBP18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 TCTN3Q6NUS6 607 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 IZUMO2Q6UXV1 221 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 ZDHHC13Q8IUH4 622 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 SVOPLQ8N434 492 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 GALNT4Q8N4A0 578 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 ZNF527Q8NB42 609 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 KIAA1143Q96AT1 154 aaPredicted RBP18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 GPN2Q9H9Y4 310 aaPredicted RBP18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 MYOTQ9UBF9 498 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 NPFFR2Q9Y5X5 522 aa18.81■□□□□ 0.6
VCPKMT-202ENST00000395860 CDHR4A6H8M9 788 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms