RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 PHF10Q8WUB8 498 aaKnown RBP12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 ZDHHC12Q96GR4 267 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 MAP6Q96JE9 813 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 PITX2Q99697 317 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 ACER3Q9NUN7 267 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 WDR70Q9NW82 654 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 KCND3Q9UK17 655 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 SLC22A7Q9Y694 548 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 CFAP54Q96N23 3096 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 PRAMEF27A3QJZ7 478 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 M0R129 80 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 DLGAP3O95886 979 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 HMGN2P05204 90 aaKnown RBP12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 CTSBP07858 339 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 NUDT6P53370 316 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 PRKAG1P54619 331 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 GNG2P59768 71 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 RPP38P78345 283 aaKnown RBP12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 GALK2Q01415 458 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 NPRL3Q12980 569 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 PUM1Q14671 1186 aaKnown RBP eCLIP12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 KCNAB1Q14722 419 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 TMEM107Q6UX40 140 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 ZNF574Q6ZN55 896 aaPredicted RBP12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 PLXDC1Q8IUK5 500 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 LRRC25Q8N386 305 aaPredicted RBP12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 NUP43Q8NFH3 380 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 GPR32P1Q8NGA4 272 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 APH1BQ8WW43 257 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 SOHLH2Q9NX45 425 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 SEC14L3Q9UDX4 400 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 EPHA6Q9UF33 1036 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 CAB39Q9Y376 341 aaPredicted RBP12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 SPACA6W5XKT8 324 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 WDFY3Q8IZQ1 3526 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 FAM186AA6NE01 2351 aa12.93□□□□□ -0.34
CSNK1E-201ENST00000359867 A0A0G2JPF8 293 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 LOC100506127A0A0U1RQW1 187 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 HNRNPCL2B2RXH8 293 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 HNRNPCL3B7ZW38 293 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 LRP3O75074 770 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 GADD45GO95257 159 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 HNRNPCL4P0DMR1 293 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 GADD45AP24522 165 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 CXCR4P61073 352 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 ENTHD1Q8IYW4 607 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 POC5Q8NA72 575 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 RCBTB1Q8NDN9 531 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 OR5D16Q8NGK9 328 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 RHOXF1Q8NHV9 184 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 COL21A1Q96P44 957 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 FEVQ99581 238 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 RAB33BQ9H082 229 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 LRRN3Q9H3W5 708 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 ZMAT5Q9UDW3 170 aaKnown RBP12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 POFUT2Q9Y2G5 429 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 GRK5P34947 590 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 DUSP3P51452 185 aaPredicted RBP12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 XKP51811 444 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 SNRPNP63162 240 aaKnown RBP12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 LASP1Q14847 261 aaKnown RBP12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 EXOC3L2Q2M3D2 409 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 CYP27C1Q4G0S4 372 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 LYSMD2Q8IV50 215 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 SVOPQ8N4V2 548 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 CSNK1A1LQ8N752 337 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 OR9A2Q8NGT5 310 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 PMEPA1Q969W9 287 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 CALML5Q9NZT1 146 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 OSGIN1Q9UJX0 560 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 LIPT1Q9Y234 373 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 BOLA1Q9Y3E2 137 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 HCN4Q9Y3Q4 1203 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 MN1Q10571 1320 aaPredicted RBP12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 IDH3BO43837 385 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 AIREO43918 545 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 MC3RP41968 323 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 PPP5CP53041 499 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 STEAP3Q658P3 488 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 WDR74Q6RFH5 385 aaPredicted RBP12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 SLC5A8Q8N695 610 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 MINDY2Q8NBR6 621 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 HRASLS5Q96KN8 279 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 ACTRT3Q9BYD9 372 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 STARD5Q9NSY2 213 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 ENOPH1Q9UHY7 261 aa12.92□□□□□ -0.34
CSNK1E-201ENST00000359867 COL5A1P20908 1838 aaPredicted RBP12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 PTPRZ1P23471 2315 aaPredicted RBP12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 A0A1W2PS29 197 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 DUXAA6NLW8 204 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 J3KTA2 159 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 TSPAN9O75954 239 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 CCNB2O95067 398 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 KCNK2O95069 426 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 AGR2O95994 175 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 NAGAP17050 411 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 MAN2A2P49641 1150 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 SMIM11AP58511 58 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 STPG1Q5TH74 334 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms