RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 ZNF155Q12901 538 aaPredicted RBP6.42□□□□□ -1.38
TRIM55-203ENST00000350034 TSPAN31Q12999 210 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 TARDBPQ13148 414 aaKnown RBP eCLIP6.42□□□□□ -1.38
TRIM55-203ENST00000350034 SLC13A2Q13183 592 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 SRSF5Q13243 272 aaKnown RBP6.42□□□□□ -1.38
TRIM55-203ENST00000350034 SERTAD2Q14140 314 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 KCNAB1Q14722 419 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 GPR68Q15743 365 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 TBCEQ15813 527 aaPredicted RBP6.42□□□□□ -1.38
TRIM55-203ENST00000350034 ZNF141Q15928 474 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 OCLNQ16625 522 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 SYT16Q17RD7 645 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 YOD1Q5VVQ6 348 aaPredicted RBP6.42□□□□□ -1.38
TRIM55-203ENST00000350034 PEAR1Q5VY43 1037 aaPredicted RBP6.42□□□□□ -1.38
TRIM55-203ENST00000350034 TMEM236Q5W0B7 351 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 TSSK4Q6SA08 328 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 NPSR1Q6W5P4 371 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 SLC16A12Q6ZSM3 486 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 RASSF6Q6ZTQ3 369 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 AHSA2Q719I0 299 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 PRICKLE2Q7Z3G6 844 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 GDF7Q7Z4P5 450 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 ZAR1Q86SH2 424 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 C11orf74Q86VG3 221 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 KIF18BQ86Y91 864 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 GRAMD2AQ8IUY3 354 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 P3H2Q8IVL5 708 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 MAML2Q8IZL2 1156 aaPredicted RBP6.42□□□□□ -1.38
TRIM55-203ENST00000350034 FAM26EQ8N5C1 309 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 CLDN22Q8N7P3 220 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 ZNF615Q8N8J6 731 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 ZSCAN1Q8NBB4 408 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 OR51Q1Q8NH59 317 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 OR1L3Q8NH93 324 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 GPR151Q8TDV0 419 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 RAB2BQ8WUD1 216 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 GAB3Q8WWW8 586 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 ACOT11Q8WXI4 607 aaPredicted RBP6.42□□□□□ -1.38
TRIM55-203ENST00000350034 FCGR1BQ92637 280 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 RORBQ92753 470 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 RIT1Q92963 219 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 MYDGFQ969H8 173 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 SLC35B4Q969S0 331 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 MMABQ96EY8 250 aaPredicted RBP6.42□□□□□ -1.38
TRIM55-203ENST00000350034 SLC41A3Q96GZ6 507 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 RBM18Q96H35 190 aaKnown RBP6.42□□□□□ -1.38
TRIM55-203ENST00000350034 OR1F2PQ96R84 312 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 PRSS27Q9BQR3 290 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 COPS4Q9BT78 406 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 PRR14Q9BWN1 585 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 RBCK1Q9BYM8 510 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 ZNF768Q9H5H4 540 aaKnown RBP6.42□□□□□ -1.38
TRIM55-203ENST00000350034 LIN28AQ9H9Z2 209 aaKnown RBP6.42□□□□□ -1.38
TRIM55-203ENST00000350034 CACYBPQ9HB71 228 aaKnown RBP6.42□□□□□ -1.38
TRIM55-203ENST00000350034 NECTIN3Q9NQS3 549 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 IMPAD1Q9NX62 359 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 NLGN3Q9NZ94 848 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 CNOT2Q9NZN8 540 aaKnown RBP6.42□□□□□ -1.38
TRIM55-203ENST00000350034 ENPP5Q9UJA9 477 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 ZNF223Q9UK11 482 aaPredicted RBP6.42□□□□□ -1.38
TRIM55-203ENST00000350034 PILRBQ9UKJ0 227 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 CLCA2Q9UQC9 943 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 NTNG1Q9Y2I2 539 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 HEMK1Q9Y5R4 338 aaPredicted RBP6.42□□□□□ -1.38
TRIM55-203ENST00000350034 U3KQA8 63 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 ZFYVE26Q68DK2 2539 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 TRAPPC13A5PLN9 417 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 EFCAB10A6NFE3 127 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 CPSF4LA6NMK7 179 aaKnown RBP6.41□□□□□ -1.38
TRIM55-203ENST00000350034 M0R129 80 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 HRKO00198 91 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 PEX12O00623 359 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 PRAMEF2O60811 474 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 BCAS1O75363 584 aaPredicted RBP6.41□□□□□ -1.38
TRIM55-203ENST00000350034 OR2B3O76000 313 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 GABARAPO95166 117 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 SOX14O95416 240 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 PDGFBP01127 241 aaPredicted RBP6.41□□□□□ -1.38
TRIM55-203ENST00000350034 ANKRD34CP0C6C1 535 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 CT45A8P0DMV1 189 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 CT45A9P0DMV2 189 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 PRG2P13727 222 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 FOLR1P15328 257 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 GNSP15586 552 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 MAOAP21397 527 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 DRD5P21918 477 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 FPR3P25089 353 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 HTR2AP28223 471 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 IFNA8P32881 189 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 STAT5AP42229 794 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 GIPRP48546 466 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 DHPSP49366 369 aaPredicted RBP6.41□□□□□ -1.38
TRIM55-203ENST00000350034 HOXC5Q00444 222 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 NFATC3Q12968 1075 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 DSG2Q14126 1118 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 ERV3-1Q14264 604 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 ZNF267Q14586 743 aaPredicted RBP6.41□□□□□ -1.38
TRIM55-203ENST00000350034 CTF1Q16619 201 aa6.41□□□□□ -1.38
TRIM55-203ENST00000350034 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.41□□□□□ -1.38
TRIM55-203ENST00000350034 ZSWIM7Q19AV6 140 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms