RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 SLC43A1O75387 559 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 MAOAP21397 527 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 CDK2P24941 298 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 GNRHRP30968 328 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 AQP2P41181 271 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 TAS2R31P59538 309 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 NKX3-2P78367 333 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 ELAVL3Q14576 367 aaKnown RBP12.12□□□□□ -0.47
COL3A1-201ENST00000304636 CFAP77Q6ZQR2 320 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 LRRC56Q8IYG6 542 aaPredicted RBP12.12□□□□□ -0.47
COL3A1-201ENST00000304636 OR56B4Q8NH76 319 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.12□□□□□ -0.47
COL3A1-201ENST00000304636 FN3KQ9H479 309 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 BIN3Q9NQY0 253 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 ZFP57Q9NU63 452 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 UGT2A1Q9Y4X1 527 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 PRSS21Q9Y6M0 314 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 SULT1C2O00338 296 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 OR7A17O14581 309 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 SSX5O60225 188 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 TGM6O95932 706 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 PGCP20142 388 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 CD6P30203 668 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 GIPRP48546 466 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 RTP2Q5QGT7 225 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 MEPCEQ7L2J0 689 aaKnown RBP12.12□□□□□ -0.47
COL3A1-201ENST00000304636 GRASPQ7Z6J2 395 aaPredicted RBP12.12□□□□□ -0.47
COL3A1-201ENST00000304636 PDZD3Q86UT5 571 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 ZNF709Q8N972 641 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 DCUN1D4Q92564 292 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 ZMYND19Q96E35 227 aaPredicted RBP12.12□□□□□ -0.47
COL3A1-201ENST00000304636 SLC25A44Q96H78 314 aaPredicted RBP12.12□□□□□ -0.47
COL3A1-201ENST00000304636 ABI3Q9P2A4 366 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 FGF18O76093 207 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 IFNA1P01562 189 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 IFNA17P01571 189 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 MGAT3Q09327 533 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 DHCR24Q15392 516 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 C3orf38Q5JPI3 329 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 Q6ZSR9 355 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 CREB3L2Q70SY1 520 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 GPR148Q8TDV2 347 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 TREX2Q9BQ50 279 aaPredicted RBP12.12□□□□□ -0.47
COL3A1-201ENST00000304636 PITHD1Q9GZP4 211 aaPredicted RBP12.12□□□□□ -0.47
COL3A1-201ENST00000304636 QPCTLQ9NXS2 382 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 J3KTA2 159 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 TNFRSF10BO14763 440 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 TSPAN15O95858 294 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 GASTP01350 101 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 ACRP10323 421 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 ARAFP10398 606 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 SGCBQ16585 318 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 PGGHGQ32M88 737 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 CYB561A3Q8NBI2 242 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 OR5M3Q8NGP4 307 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 PXYLP1Q8TE99 480 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 MMABQ96EY8 250 aaPredicted RBP12.12□□□□□ -0.47
COL3A1-201ENST00000304636 MED30Q96HR3 178 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 LMF1Q96S06 567 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 PTGES2Q9H7Z7 377 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 LTBP3Q9NS15 1303 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 TRAPPC2P0DI81 140 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 TRAPPC2BP0DI82 140 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 ACPPP15309 386 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 CCR7P32248 378 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 PIGAP37287 484 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 FAPQ12884 760 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 OR4N5Q8IXE1 308 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 OR5H2Q8NGV7 314 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 ASB11Q8WXH4 323 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 APMAPQ9HDC9 416 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 TLR9Q9NR96 1032 aa12.12□□□□□ -0.47
COL3A1-201ENST00000304636 NDRG2Q9UN36 371 aaKnown RBP12.12□□□□□ -0.47
COL3A1-201ENST00000304636 A0A0U1RQS6 177 aa12.11□□□□□ -0.47
COL3A1-201ENST00000304636 ANTXRLA6NF34 631 aa12.11□□□□□ -0.47
COL3A1-201ENST00000304636 RNH1P13489 461 aaKnown RBP12.11□□□□□ -0.47
COL3A1-201ENST00000304636 ESCO2Q56NI9 601 aa12.11□□□□□ -0.47
COL3A1-201ENST00000304636 FCRLBQ6BAA4 426 aa12.11□□□□□ -0.47
COL3A1-201ENST00000304636 ZNF619Q8N2I2 560 aa12.11□□□□□ -0.47
COL3A1-201ENST00000304636 Q8N9G6 341 aaPredicted RBP12.11□□□□□ -0.47
COL3A1-201ENST00000304636 OR1J4Q8NGS1 313 aa12.11□□□□□ -0.47
COL3A1-201ENST00000304636 OR14K1Q8NGZ2 314 aa12.11□□□□□ -0.47
COL3A1-201ENST00000304636 GIMAP1Q8WWP7 306 aa12.11□□□□□ -0.47
COL3A1-201ENST00000304636 CDC6Q99741 560 aa12.11□□□□□ -0.47
COL3A1-201ENST00000304636 SIAEQ9HAT2 523 aa12.11□□□□□ -0.47
COL3A1-201ENST00000304636 MBLAC1A4D2B0 266 aaPredicted RBP12.11□□□□□ -0.47
COL3A1-201ENST00000304636 EGFP01133 1207 aa12.11□□□□□ -0.47
COL3A1-201ENST00000304636 UBBP0CG47 229 aa12.11□□□□□ -0.47
COL3A1-201ENST00000304636 UBCP0CG48 685 aaKnown RBP12.11□□□□□ -0.47
COL3A1-201ENST00000304636 TPT1P13693 172 aaKnown RBP12.11□□□□□ -0.47
COL3A1-201ENST00000304636 TYRP1P17643 537 aa12.11□□□□□ -0.47
COL3A1-201ENST00000304636 CTXN1P60606 82 aa12.11□□□□□ -0.47
COL3A1-201ENST00000304636 RPS27AP62979 156 aaKnown RBP12.11□□□□□ -0.47
COL3A1-201ENST00000304636 UBA52P62987 128 aaKnown RBP12.11□□□□□ -0.47
COL3A1-201ENST00000304636 SIM1P81133 766 aaPredicted RBP12.11□□□□□ -0.47
COL3A1-201ENST00000304636 PIP5KL1Q5T9C9 394 aa12.11□□□□□ -0.47
COL3A1-201ENST00000304636 C4orf36Q96KX1 117 aa12.11□□□□□ -0.47
COL3A1-201ENST00000304636 FCRL1Q96LA6 429 aa12.11□□□□□ -0.47
COL3A1-201ENST00000304636 TXNL4BQ9NX01 149 aaKnown RBP12.11□□□□□ -0.47
COL3A1-201ENST00000304636 V9GY05 133 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms