RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 RPL3P39023 403 aaKnown RBP12.22□□□□□ -0.45
MSH2-201ENST00000233146 CSNK1EP49674 416 aaKnown RBP12.22□□□□□ -0.45
MSH2-201ENST00000233146 WNT3P56703 355 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 RING1Q06587 406 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 IHHQ14623 411 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 PYY3Q5JQD4 70 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 RTL3Q8N8U3 475 aaKnown RBP12.22□□□□□ -0.45
MSH2-201ENST00000233146 C11orf65Q8NCR3 313 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 THEM6Q8WUY1 208 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 SEC11CQ9BY50 192 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 MYOZ2Q9NPC6 264 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 ACSS1Q9NUB1 689 aaPredicted RBP12.22□□□□□ -0.45
MSH2-201ENST00000233146 C2orf42Q9NWW7 574 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 TRAPPC13A5PLN9 417 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 LRRN3E7EW58 273 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 FAM227AF5H4B4 570 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 GSTZ1O43708 216 aaPredicted RBP12.22□□□□□ -0.45
MSH2-201ENST00000233146 ATXN1LP0C7T5 689 aaKnown RBP12.22□□□□□ -0.45
MSH2-201ENST00000233146 NQO2P16083 231 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 GALP22466 123 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 CDH4P55283 916 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 H2BFSP57053 126 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 PITPNAQ00169 270 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 EOGTQ5NDL2 527 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 ELFN2Q5R3F8 820 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 PRR5LQ6MZQ0 368 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 OR2W3Q7Z3T1 314 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 TGIF2LXQ8IUE1 241 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 ACOT11Q8WXI4 607 aaPredicted RBP12.22□□□□□ -0.45
MSH2-201ENST00000233146 PIGKQ92643 395 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 MISP3Q96FF7 219 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 CDCA7Q9BWT1 371 aaPredicted RBP12.22□□□□□ -0.45
MSH2-201ENST00000233146 TKTL2Q9H0I9 626 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 LRRN3Q9H3W5 708 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 XKR8Q9H6D3 395 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 DZANK1Q9NVP4 752 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 DDIT4Q9NX09 232 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 ST3GAL5Q9UNP4 418 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 PCDHB11Q9Y5F2 797 aa12.22□□□□□ -0.45
MSH2-201ENST00000233146 IGKV6D-21A0A0A0MT36 114 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 URADA6NGE7 173 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 NPIPB9F8W1W9 429 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 TLR5O60602 858 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 INSRRP14616 1297 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 CELP19835 753 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 HTR2AP28223 471 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 CCR9P51686 369 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 DLX5P56178 289 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 IL2P60568 153 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 GMFBP60983 142 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 CXADRP78310 365 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 RAB40BQ12829 278 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 SIDT2Q8NBJ9 832 aaKnown RBP12.21□□□□□ -0.45
MSH2-201ENST00000233146 OSTF1Q92882 214 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 FGF11Q92914 225 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 HIST1H2BAQ96A08 127 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 ZFP3Q96NJ6 502 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 FLRT1Q9NZU1 646 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 TP53TG5Q9Y2B4 290 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 EXOSC1Q9Y3B2 195 aaKnown RBP12.21□□□□□ -0.45
MSH2-201ENST00000233146 ARL5AQ9Y689 179 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 PDCD11Q14690 1871 aaKnown RBP12.21□□□□□ -0.45
MSH2-201ENST00000233146 NYNRINQ9P2P1 1898 aaKnown RBP12.21□□□□□ -0.45
MSH2-201ENST00000233146 PCDH7O60245 1069 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 ONECUT3O60422 494 aaPredicted RBP12.21□□□□□ -0.45
MSH2-201ENST00000233146 IL5P05113 134 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 OR12D1P0DN82 309 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 SAGP10523 405 aaPredicted RBP12.21□□□□□ -0.45
MSH2-201ENST00000233146 ACP2P11117 423 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 SDC1P18827 310 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 CD86P42081 329 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 PNLIPRP2P54317 469 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 POU4F2Q12837 409 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 ZNF511Q8NB15 262 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 RNFT2Q96EX2 444 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 OCSTAMPQ9BR26 566 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 TM6SF2Q9BZW4 377 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 TVP23BQ9NYZ1 205 aa12.21□□□□□ -0.45
MSH2-201ENST00000233146 COL11A1P12107 1806 aaPredicted RBP12.21□□□□□ -0.46
MSH2-201ENST00000233146 LOC285556D6RIA3 1793 aa12.21□□□□□ -0.46
MSH2-201ENST00000233146 BTBD17A6NE02 478 aa12.21□□□□□ -0.46
MSH2-201ENST00000233146 ANHXE9PGG2 379 aa12.21□□□□□ -0.46
MSH2-201ENST00000233146 AP4M1O00189 453 aa12.21□□□□□ -0.46
MSH2-201ENST00000233146 SLC25A12O75746 678 aa12.21□□□□□ -0.46
MSH2-201ENST00000233146 IFNA10P01566 189 aa12.21□□□□□ -0.46
MSH2-201ENST00000233146 MMP2P08253 660 aa12.21□□□□□ -0.46
MSH2-201ENST00000233146 EBLN1P0CF75 366 aa12.21□□□□□ -0.46
MSH2-201ENST00000233146 AKIRIN2Q53H80 203 aa12.21□□□□□ -0.46
MSH2-201ENST00000233146 KDF1Q8NAX2 398 aaPredicted RBP12.21□□□□□ -0.46
MSH2-201ENST00000233146 OR13C4Q8NGS5 318 aa12.21□□□□□ -0.46
MSH2-201ENST00000233146 SCLYQ96I15 445 aa12.21□□□□□ -0.46
MSH2-201ENST00000233146 PCYT2Q99447 389 aa12.21□□□□□ -0.46
MSH2-201ENST00000233146 NAA11Q9BSU3 229 aaPredicted RBP12.21□□□□□ -0.46
MSH2-201ENST00000233146 GLIS2Q9BZE0 524 aaPredicted RBP12.21□□□□□ -0.46
MSH2-201ENST00000233146 MRPL37Q9BZE1 423 aaKnown RBP12.21□□□□□ -0.46
MSH2-201ENST00000233146 ACPTQ9BZG2 426 aa12.21□□□□□ -0.46
MSH2-201ENST00000233146 AP5M1Q9H0R1 490 aa12.21□□□□□ -0.46
MSH2-201ENST00000233146 WDCPQ9H6R7 721 aa12.21□□□□□ -0.46
MSH2-201ENST00000233146 GPN1Q9HCN4 374 aaPredicted RBP12.21□□□□□ -0.46
MSH2-201ENST00000233146 HRASLSQ9HDD0 168 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms