RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 OMA1Q96E52 524 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 SLC47A1Q96FL8 570 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 TPD52L3Q96J77 140 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 DOHHQ9BU89 302 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 PINK1Q9BXM7 581 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 SAP130Q9H0E3 1048 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 EVA1AQ9H8M9 152 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 ATP13A2Q9NQ11 1180 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 ABI3Q9P2A4 366 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 MKLN1Q9UL63 735 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 ZNF232Q9UNY5 417 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 SLC9A8Q9Y2E8 581 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 SEC16AO15027 2179 aa11.84□□□□□ -0.51
CLK3-214ENST00000564096 AGAP5A6NIR3 686 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 WWP2O00308 870 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 SYT5O00445 386 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 SCDO00767 359 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 PRKNO60260 465 aaPredicted RBP11.83□□□□□ -0.52
CLK3-214ENST00000564096 REM1O75628 298 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 ADRB1P08588 477 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 PABPC4LP0CB38 370 aaKnown RBP11.83□□□□□ -0.52
CLK3-214ENST00000564096 RAP2AP10114 183 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 IL7RP16871 459 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 NAGAP17050 411 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 ABCD3P28288 659 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 SLC7A1P30825 629 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 SELENOWP63302 87 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 RPP38P78345 283 aaKnown RBP11.83□□□□□ -0.52
CLK3-214ENST00000564096 CDC20Q12834 499 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 CHAF1BQ13112 559 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 RIPK1Q13546 671 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 TBCELQ5QJ74 424 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 RNF220Q5VTB9 566 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 TCTN3Q6NUS6 607 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 DHRS4L2Q6PKH6 230 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 GALNT10Q86SR1 603 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 CMIPQ8IY22 773 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 ADGRG5Q8IZF4 528 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 ZNF614Q8N883 585 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 FAM110BQ8TC76 370 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 THAP3Q8WTV1 239 aaPredicted RBP11.83□□□□□ -0.52
CLK3-214ENST00000564096 EFHD2Q96C19 240 aaPredicted RBP11.83□□□□□ -0.52
CLK3-214ENST00000564096 TMCO6Q96DC7 493 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 DUS3LQ96G46 650 aaKnown RBP11.83□□□□□ -0.52
CLK3-214ENST00000564096 PYURFQ96I23 114 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 CCDC86Q9H6F5 360 aaKnown RBP11.83□□□□□ -0.52
CLK3-214ENST00000564096 HHATLQ9HCP6 504 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 DKK4Q9UBT3 224 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 POLHQ9Y253 713 aa11.83□□□□□ -0.52
CLK3-214ENST00000564096 ZNF443Q9Y2A4 671 aaPredicted RBP11.83□□□□□ -0.52
CLK3-214ENST00000564096 KNTC1P50748 2209 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 OR6C70A6NIJ9 312 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 H3BNH8 94 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 KLK10O43240 276 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 FCMRO60667 390 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 PPM1BO75688 479 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 OR2J2O76002 312 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 KRT36O76013 467 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 PRKD3O94806 890 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 MFN2O95140 757 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 IFNW1P05000 195 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 NGFRP08138 427 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 PRKAR1AP10644 381 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 ITGAMP11215 1152 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 NID1P14543 1247 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 ITGA2P17301 1181 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 ENDOUP21128 410 aaKnown RBP11.82□□□□□ -0.52
CLK3-214ENST00000564096 RPS4Y1P22090 263 aaKnown RBP11.82□□□□□ -0.52
CLK3-214ENST00000564096 ITGA3P26006 1051 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 CLK3P49761 638 aaKnown RBP11.82□□□□□ -0.52
CLK3-214ENST00000564096 SSR4P51571 173 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 PNLIPRP2P54317 469 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 ATP12AP54707 1039 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 KCNC4Q03721 635 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 RCN1Q15293 331 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 OPN5Q6U736 354 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 ENPP6Q6UWR7 440 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 PRR22Q8IZ63 422 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 SMYD1Q8NB12 490 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 CANT1Q8WVQ1 401 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 PYDC1Q8WXC3 89 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 ASB15Q8WXK1 588 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 NAF1Q96HR8 494 aaKnown RBP11.82□□□□□ -0.52
CLK3-214ENST00000564096 ZNF354BQ96LW1 612 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 RASL10BQ96S79 203 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 CCNL2Q96S94 520 aaPredicted RBP11.82□□□□□ -0.52
CLK3-214ENST00000564096 ADOQ96SZ5 270 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 SEPHS2Q99611 448 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 QRSL1Q9H0R6 528 aaKnown RBP11.82□□□□□ -0.52
CLK3-214ENST00000564096 DCLRE1BQ9H816 532 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 S100A14Q9HCY8 104 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 UBQLN4Q9NRR5 601 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 CCM2LQ9NUG4 571 aaPredicted RBP11.82□□□□□ -0.52
CLK3-214ENST00000564096 ABCG2Q9UNQ0 655 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 YARS2Q9Y2Z4 477 aaKnown RBP11.82□□□□□ -0.52
CLK3-214ENST00000564096 AP4S1Q9Y587 144 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 NPFFR2Q9Y5X5 522 aa11.82□□□□□ -0.52
CLK3-214ENST00000564096 TP53I11O14683 189 aa11.81□□□□□ -0.52
CLK3-214ENST00000564096 RRP8O43159 456 aaKnown RBP11.81□□□□□ -0.52
CLK3-214ENST00000564096 HNRNPRO43390 633 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms