RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 USP22Q9UPT9 525 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 AURKCQ9UQB9 309 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 POLHQ9Y253 713 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 SLC9A8Q9Y2E8 581 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 FAM32AQ9Y421 112 aaKnown RBP8.52□□□□□ -1.05
ACTN1-218ENST00000556343 PCDHGA10Q9Y5H3 936 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 NPFFR2Q9Y5X5 522 aa8.52□□□□□ -1.05
ACTN1-218ENST00000556343 GPC6Q9Y625 555 aaPredicted RBP8.52□□□□□ -1.05
ACTN1-218ENST00000556343 MRPS18BQ9Y676 258 aaKnown RBP8.52□□□□□ -1.05
ACTN1-218ENST00000556343 SCN2AQ99250 2005 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 TCRBV3S1A0A5B6 114 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 OR6C70A6NIJ9 312 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 WWP2O00308 870 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 SYT5O00445 386 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 HNRNPRO43390 633 aaKnown RBP8.51□□□□□ -1.05
ACTN1-218ENST00000556343 PPM1BO75688 479 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 C1QCP02747 245 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 CHRM4P08173 479 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 ADRB1P08588 477 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 PABPC4LP0CB38 370 aaKnown RBP8.51□□□□□ -1.05
ACTN1-218ENST00000556343 RAP2AP10114 183 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 SPINK2P20155 84 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 ATP6V1B2P21281 511 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 ITGA3P26006 1051 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 SLC7A1P30825 629 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 PRKAR1BP31321 381 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 CASRP41180 1078 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 ATP12AP54707 1039 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 KCNC4Q03721 635 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 CHAF1BQ13112 559 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 CCNIQ14094 377 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 RPS26P11Q5JNZ5 115 aaPredicted RBP8.51□□□□□ -1.05
ACTN1-218ENST00000556343 TBCELQ5QJ74 424 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 DCAF10Q5QP82 559 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 CCNJQ5T5M9 372 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 TYW3Q6IPR3 259 aaKnown RBP8.51□□□□□ -1.05
ACTN1-218ENST00000556343 TCTN3Q6NUS6 607 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 FRRS1Q6ZNA5 592 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 VASH2Q86V25 355 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 CYP4Z1Q86W10 505 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 CMIPQ8IY22 773 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 TMEM156Q8N614 296 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 ZNF441Q8N8Z8 693 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 THAP3Q8WTV1 239 aaPredicted RBP8.51□□□□□ -1.05
ACTN1-218ENST00000556343 GEMIN6Q8WXD5 167 aaKnown RBP8.51□□□□□ -1.05
ACTN1-218ENST00000556343 TTC9Q92623 222 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 SLC47A1Q96FL8 570 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 DUS3LQ96G46 650 aaKnown RBP8.51□□□□□ -1.05
ACTN1-218ENST00000556343 NAF1Q96HR8 494 aaKnown RBP8.51□□□□□ -1.05
ACTN1-218ENST00000556343 THOC3Q96J01 351 aaKnown RBP8.51□□□□□ -1.05
ACTN1-218ENST00000556343 SLC38A1Q9H2H9 487 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 CDCP1Q9H5V8 836 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 DCLRE1BQ9H816 532 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 S100A14Q9HCY8 104 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 CCM2LQ9NUG4 571 aaPredicted RBP8.51□□□□□ -1.05
ACTN1-218ENST00000556343 PRDM4Q9UKN5 801 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 MKLN1Q9UL63 735 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 WASF3Q9UPY6 502 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 SLC35A3Q9Y2D2 325 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 DTX4Q9Y2E6 619 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 AP4S1Q9Y587 144 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 NUP210LQ5VU65 1888 aa8.51□□□□□ -1.05
ACTN1-218ENST00000556343 PRAMEF27A3QJZ7 478 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 AGAP5A6NIR3 686 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 GTPBP1O00178 669 aaKnown RBP8.5□□□□□ -1.05
ACTN1-218ENST00000556343 KIAA0513O60268 411 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 TSPAN2O60636 221 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 FCMRO60667 390 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 NME6O75414 186 aaPredicted RBP8.5□□□□□ -1.05
ACTN1-218ENST00000556343 PRKD3O94806 890 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 MFN2O95140 757 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 UTS2O95399 124 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 BAG2O95816 211 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 FESP07332 822 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 UQCRBP14927 111 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 ABCD3P28288 659 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 DCTP40126 519 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 KCNJ5P48544 419 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 UCNP55089 124 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 MLF1P58340 268 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 FUT5Q11128 374 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 RIPK1Q13546 671 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 MAPK11Q15759 364 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 ZNF141Q15928 474 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 NNATQ16517 81 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 SDK2Q58EX2 2172 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 ABHD17BQ5VST6 288 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 H3F3CQ6NXT2 135 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 DHRS4L2Q6PKH6 230 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 CCDC81Q6ZN84 652 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 MISPQ8IVT2 679 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 ZNF440Q8IYI8 595 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 GALNT16Q8N428 558 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 ZNF614Q8N883 585 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 OR4N2Q8NGD1 307 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 NR4A3Q92570 626 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 TAMM41Q96BW9 452 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 EFHD2Q96C19 240 aaPredicted RBP8.5□□□□□ -1.05
ACTN1-218ENST00000556343 DTNBP1Q96EV8 351 aa8.5□□□□□ -1.05
ACTN1-218ENST00000556343 SGCZQ96LD1 299 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms