RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 SPPL2AQ8TCT8 520 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 HAVCR2Q8TDQ0 301 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 GATAD2BQ8WXI9 593 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 RGMAQ96B86 450 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 POM121Q96HA1 1249 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 ZBED3Q96IU2 234 aaPredicted RBP8.98□□□□□ -0.97
SIX4-202ENST00000554079 GPR20Q99678 358 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 SYT17Q9BSW7 474 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 AP5M1Q9H0R1 490 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 CHST8Q9H2A9 424 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 CACYBPQ9HB71 228 aaKnown RBP8.98□□□□□ -0.97
SIX4-202ENST00000554079 CTPS2Q9NRF8 586 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 THSD1Q9NS62 852 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 ACSS1Q9NUB1 689 aaPredicted RBP8.98□□□□□ -0.97
SIX4-202ENST00000554079 ACER3Q9NUN7 267 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 NKIRAS2Q9NYR9 191 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 PLXNA4Q9HCM2 1894 aa8.98□□□□□ -0.97
SIX4-202ENST00000554079 OR6C74A6NCV1 312 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 ARRDC5A6NEK1 342 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 RFPL4AA6NLU0 287 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 RFPL4AL1F8VTS6 287 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 PSMD9O00233 223 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 RFXAPO00287 272 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 MBP02144 154 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 NR2F6P10588 404 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 NR2C1P13056 603 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 PAX1P15863 534 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 NQO2P16083 231 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 MGMTP16455 207 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 BDKRB2P30411 391 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 MTNR1BP49286 362 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 CSNK1EP49674 416 aaKnown RBP8.97□□□□□ -0.97
SIX4-202ENST00000554079 MMP15P51511 669 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 DGKEP52429 567 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 WNT3AP56704 352 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 NUTF2P61970 127 aaKnown RBP8.97□□□□□ -0.97
SIX4-202ENST00000554079 HNRNPKP61978 463 aaKnown RBP eCLIP8.97□□□□□ -0.97
SIX4-202ENST00000554079 CXADRP78310 365 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 HMGCS1Q01581 520 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 POU4F2Q12837 409 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 ILF3Q12906 894 aaKnown RBP eCLIP8.97□□□□□ -0.97
SIX4-202ENST00000554079 INSL4Q14641 139 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 SLC5A12Q1EHB4 618 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 AKIRIN2Q53H80 203 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 ZNF626Q68DY1 528 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 ZNF770Q6IQ21 691 aaPredicted RBP8.97□□□□□ -0.97
SIX4-202ENST00000554079 NCEH1Q6PIU2 408 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 OR2W3Q7Z3T1 314 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 CFAP206Q8IYR0 622 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 SAMD12Q8N8I0 201 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 BOLLQ8N9W6 283 aaKnown RBP8.97□□□□□ -0.97
SIX4-202ENST00000554079 AVL9Q8NBF6 648 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 HUS1BQ8NHY5 278 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 THAP4Q8WY91 577 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 OSTF1Q92882 214 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 WNT8BQ93098 351 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 SLC22A18Q96BI1 424 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 OR1F2PQ96R84 312 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 TEAD3Q99594 435 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 TOLLIPQ9H0E2 274 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 METTL9Q9H1A3 318 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 RPF1Q9H9Y2 349 aaKnown RBP8.97□□□□□ -0.97
SIX4-202ENST00000554079 NMNAT1Q9HAN9 279 aaPredicted RBP8.97□□□□□ -0.97
SIX4-202ENST00000554079 LRTM1Q9HBL6 345 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 DZANK1Q9NVP4 752 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 DLGAP4Q9Y2H0 992 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 OR10H1Q9Y4A9 318 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 SNX10Q9Y5X0 201 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 PLXNA3P51805 1871 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 NINQ8N4C6 2090 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 TRBV23OR9-2A0A075B6M9 112 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 C2orf92A0A1B0GVN3 265 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 CARNS1A5YM72 827 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 OR6C76A6NM76 312 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 J3KTA2 159 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 AP4M1O00189 453 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 DVL2O14641 736 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 BCAT2O15382 392 aaPredicted RBP8.97□□□□□ -0.97
SIX4-202ENST00000554079 OR2T1O43869 369 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 GASTP01350 101 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 SRPRAP08240 638 aaKnown RBP8.97□□□□□ -0.97
SIX4-202ENST00000554079 IGFBP1P08833 259 aaPredicted RBP8.97□□□□□ -0.97
SIX4-202ENST00000554079 ADRB3P13945 408 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 ELNP15502 786 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 ACHEP22303 614 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 DDTP30046 118 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 CAP2P40123 477 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 PMELP40967 661 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 EFNA5P52803 228 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 HMGA2P52926 109 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 HCCSP53701 268 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 RPS14P62263 151 aaKnown RBP8.97□□□□□ -0.97
SIX4-202ENST00000554079 MEF2AQ02078 507 aaPredicted RBP8.97□□□□□ -0.97
SIX4-202ENST00000554079 RING1Q06587 406 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 XKR6Q5GH73 641 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 CRB2Q5IJ48 1285 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 AADACL4Q5VUY2 407 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 MTFR2Q6P444 385 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 MSANTD1Q6ZTZ1 278 aa8.97□□□□□ -0.97
SIX4-202ENST00000554079 TRIM46Q7Z4K8 759 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms