RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 POU6F2P78424 691 aaPredicted RBP6.55□□□□□ -1.36
SPPL3-209ENST00000545209 CHRNEQ04844 493 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 CSTF1Q05048 431 aaKnown RBP6.55□□□□□ -1.36
SPPL3-209ENST00000545209 MAP4K2Q12851 820 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 BNIP3Q12983 259 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 RAPSNQ13702 412 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 DGCR6Q14129 220 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 SERTAD2Q14140 314 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 NR0B2Q15466 257 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 DUSP5Q16690 384 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 MEP1AQ16819 746 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 PRICKLE4Q2TBC4 344 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 ARHGAP11BQ3KRB8 267 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 TRMT12Q53H54 448 aaKnown RBP6.55□□□□□ -1.36
SPPL3-209ENST00000545209 YOD1Q5VVQ6 348 aaPredicted RBP6.55□□□□□ -1.36
SPPL3-209ENST00000545209 FOXB2Q5VYV0 432 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 TCTN3Q6NUS6 607 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 WDR74Q6RFH5 385 aaPredicted RBP6.55□□□□□ -1.36
SPPL3-209ENST00000545209 RBM44Q6ZP01 1051 aaKnown RBP6.55□□□□□ -1.36
SPPL3-209ENST00000545209 SULF2Q8IWU5 870 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 SLC25A45Q8N413 288 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 Q8N9G6 341 aaPredicted RBP6.55□□□□□ -1.36
SPPL3-209ENST00000545209 TMEM52Q8NDY8 209 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 OR52P1PQ8NH57 321 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 GPR151Q8TDV0 419 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 EDAQ92838 391 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 CDS1Q92903 461 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 RIT1Q92963 219 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 ZNF566Q969W8 418 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 PEX11GQ96HA9 241 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 HRASLS5Q96KN8 279 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 NECAB3Q96P71 396 aaPredicted RBP6.55□□□□□ -1.36
SPPL3-209ENST00000545209 TSC22D3Q99576 134 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 NDC1Q9BTX1 674 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 YIPF2Q9BWQ6 316 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 UCK2Q9BZX2 261 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 YIPF3Q9GZM5 350 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 EVA1AQ9H8M9 152 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 ANKRA2Q9H9E1 313 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 POLR1BQ9H9Y6 1135 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 CXorf21Q9HAI6 301 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 CCNB1IP1Q9NPC3 277 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 CUTCQ9NTM9 273 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 TMEM74BQ9NUR3 256 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 IMPAD1Q9NX62 359 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 SERTAD3Q9UJW9 196 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 GMEB2Q9UKD1 530 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 ACAD8Q9UKU7 415 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 ZNF443Q9Y2A4 671 aaPredicted RBP6.55□□□□□ -1.36
SPPL3-209ENST00000545209 KCNE3Q9Y6H6 103 aa6.55□□□□□ -1.36
SPPL3-209ENST00000545209 CEP192Q8TEP8 1941 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 TRIOO75962 3097 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 CACNA1EQ15878 2313 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 TMEM131Q92545 1883 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 TRBV4-1A0A0J9YWV2 114 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 A0A1B0GTQ1 180 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 SYNDIG1LA6NDD5 238 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 VGLL3A8MV65 326 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 FFAR1O14842 300 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 PCDH17O14917 1159 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 TOX3O15405 576 aaPredicted RBP6.54□□□□□ -1.36
SPPL3-209ENST00000545209 PCDHGA12O60330 932 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 MPZL2O60487 215 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 MRPS14O60783 128 aaKnown RBP6.54□□□□□ -1.36
SPPL3-209ENST00000545209 PRAMEF2O60811 474 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 NME6O75414 186 aaPredicted RBP6.54□□□□□ -1.36
SPPL3-209ENST00000545209 IFNA16P05015 189 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 CFIP05156 583 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 DBIP07108 87 aaKnown RBP6.54□□□□□ -1.36
SPPL3-209ENST00000545209 MSL3P1P0C860 447 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 TDGF1P13385 188 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 NME2P22392 152 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 ELAVL4P26378 380 aaKnown RBP6.54□□□□□ -1.36
SPPL3-209ENST00000545209 CD1CP29017 333 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 GALNSP34059 522 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 GABRA3P34903 492 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 STT3AP46977 705 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 CLK3P49761 638 aaKnown RBP6.54□□□□□ -1.36
SPPL3-209ENST00000545209 SEPHS1P49903 392 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 PDX1P52945 283 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 CDC42P60953 191 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 CXCR4P61073 352 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 IGLV3-21P80748 117 aaPredicted RBP6.54□□□□□ -1.36
SPPL3-209ENST00000545209 MAT1AQ00266 395 aaKnown RBP6.54□□□□□ -1.36
SPPL3-209ENST00000545209 MGAT2Q10469 447 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 DUSP8Q13202 625 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 CDK5R2Q13319 367 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 KCNAB1Q14722 419 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 MAD2L1BPQ15013 274 aaPredicted RBP6.54□□□□□ -1.36
SPPL3-209ENST00000545209 EXOSC7Q15024 291 aaKnown RBP6.54□□□□□ -1.36
SPPL3-209ENST00000545209 TRAM2Q15035 370 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 CTU2Q2VPK5 515 aaKnown RBP6.54□□□□□ -1.36
SPPL3-209ENST00000545209 CNPY1Q3B7I2 92 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 PLK5Q496M5 336 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 ZBED5Q49AG3 693 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 SNAP47Q5SQN1 464 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 DCST2Q5T1A1 773 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 FRRS1Q6ZNA5 592 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 KCTD8Q6ZWB6 473 aa6.54□□□□□ -1.36
SPPL3-209ENST00000545209 PLEKHM3Q6ZWE6 761 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms