RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 BGNP21810 368 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 ELAVL4P26378 380 aaKnown RBP6.75□□□□□ -1.33
CPSF7-224ENST00000544990 GDF1P27539 372 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 IL12BP29460 328 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 ARRB2P32121 409 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 MC3RP41968 323 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 CASP3P42574 277 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 MAN2A2P49641 1150 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 SMSP52788 366 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 PNLIPRP2P54317 469 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 PSMD4P55036 377 aaKnown RBP6.75□□□□□ -1.33
CPSF7-224ENST00000544990 MAGOHP61326 146 aaKnown RBP6.75□□□□□ -1.33
CPSF7-224ENST00000544990 ZNF155Q12901 538 aaPredicted RBP6.75□□□□□ -1.33
CPSF7-224ENST00000544990 HSPB3Q12988 150 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 DUSP8Q13202 625 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 SNTA1Q13424 505 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 EFR3AQ14156 821 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 CASP8Q14790 479 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 PRSS53Q2L4Q9 553 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 SMU1Q2TAY7 513 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 CT45A2Q5DJT8 189 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 IL23RQ5VWK5 629 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 ATG16L1Q676U5 607 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 TMEM211Q6ICI0 200 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 SLC30A6Q6NXT4 461 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 TMEM81Q6P7N7 255 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 XKRXQ6PP77 449 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 TMEM107Q6UX40 140 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 MAMDC2Q7Z304 686 aaPredicted RBP6.75□□□□□ -1.33
CPSF7-224ENST00000544990 DOLPP1Q86YN1 238 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 SLC44A2Q8IWA5 706 aaPredicted RBP6.75□□□□□ -1.33
CPSF7-224ENST00000544990 LIX1Q8N485 282 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 ZNF781Q8N8C0 355 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 SIMC1Q8NDZ2 872 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 OR7G2Q8NG99 324 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 CEP70Q8NHQ1 597 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 CLHC1Q8NHS4 586 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 FAM57AQ8TBR7 257 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 TMBIM1Q969X1 311 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 SARAFQ96BY9 339 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 DTNBP1Q96EV8 351 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 CCDC120Q96HB5 630 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 C3orf30Q96M34 536 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 VSTM2LQ96N03 204 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 RILPQ96NA2 401 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 COL21A1Q96P44 957 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 BTBD9Q96Q07 612 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 C1orf50Q9BV19 199 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 ANKRA2Q9H9E1 313 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 C3orf14Q9HBI5 128 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 PROK2Q9HC23 129 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 Q9N2J8 555 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 ACKR4Q9NPB9 350 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 ACSS1Q9NUB1 689 aaPredicted RBP6.75□□□□□ -1.33
CPSF7-224ENST00000544990 ATAD3AQ9NVI7 634 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 DDX18Q9NVP1 670 aaKnown RBP6.75□□□□□ -1.33
CPSF7-224ENST00000544990 GPATCH2Q9NW75 528 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 ARGLU1Q9NWB6 273 aaPredicted RBP6.75□□□□□ -1.33
CPSF7-224ENST00000544990 GFOD1Q9NXC2 390 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 KLRF1Q9NZS2 232 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 TINAGQ9UJW2 476 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 MEMO1Q9Y316 297 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 OR10H1Q9Y4A9 318 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 ICE1Q9Y2F5 2266 aa6.75□□□□□ -1.33
CPSF7-224ENST00000544990 RELNP78509 3460 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 PTPN13Q12923 2485 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 NCKAP5O14513 1909 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 TRGV5A0A0B4J1U4 118 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 A0A1B0GVC2 190 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 CYSRT1A8MQ03 144 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 NPIPA2E9PIF3 369 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 E9PLN8 166 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 NPIPA3F8WFD2 350 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 UPK1AO00322 258 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 AQP7O14520 342 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 BCKDKO14874 412 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 SCAMP2O15127 329 aaKnown RBP6.74□□□□□ -1.33
CPSF7-224ENST00000544990 EMC8O43402 210 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 ICOSLGO75144 302 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 UGT2B11O75310 529 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 TRIM3O75382 744 aaPredicted RBP6.74□□□□□ -1.33
CPSF7-224ENST00000544990 TRAPPC6AO75865 159 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 F13BP05160 661 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 RNF224P0DH78 156 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 FSTP19883 344 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 AGAP20933 346 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 PRPS1L1P21108 318 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 FRKP42685 505 aaPredicted RBP6.74□□□□□ -1.33
CPSF7-224ENST00000544990 CORO7P57737 925 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 PSG6Q00889 435 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 EMX2Q04743 252 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 BST1Q10588 318 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 PDE7AQ13946 482 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 DOC2BQ14184 412 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 MLC1Q15049 377 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 TOMM20Q15388 145 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 PDCD2Q16342 344 aaPredicted RBP6.74□□□□□ -1.33
CPSF7-224ENST00000544990 DECR1Q16698 335 aa6.74□□□□□ -1.33
CPSF7-224ENST00000544990 LSM12Q3MHD2 195 aaKnown RBP6.74□□□□□ -1.33
CPSF7-224ENST00000544990 VPS26BQ4G0F5 336 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms