RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 FAM13CQ8NE31 585 aa14.32□□□□□ -0.12
CNN1-202ENST00000535659 OR2T12Q8NG77 320 aa14.32□□□□□ -0.12
CNN1-202ENST00000535659 HGDQ93099 445 aa14.32□□□□□ -0.12
CNN1-202ENST00000535659 TMCO6Q96DC7 493 aa14.32□□□□□ -0.12
CNN1-202ENST00000535659 REXO5Q96IC2 774 aaKnown RBP14.32□□□□□ -0.12
CNN1-202ENST00000535659 ZNF350Q9GZX5 532 aa14.32□□□□□ -0.12
CNN1-202ENST00000535659 HOXD1Q9GZZ0 328 aa14.32□□□□□ -0.12
CNN1-202ENST00000535659 SAP130Q9H0E3 1048 aa14.32□□□□□ -0.12
CNN1-202ENST00000535659 ADNPQ9H2P0 1102 aa14.32□□□□□ -0.12
CNN1-202ENST00000535659 MTHFD2LQ9H903 347 aaPredicted RBP14.32□□□□□ -0.12
CNN1-202ENST00000535659 TUBD1Q9UJT1 453 aa14.32□□□□□ -0.12
CNN1-202ENST00000535659 MKLN1Q9UL63 735 aa14.32□□□□□ -0.12
CNN1-202ENST00000535659 FASNP49327 2511 aaKnown RBP14.32□□□□□ -0.12
CNN1-202ENST00000535659 A0A0G2JPF8 293 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 HNRNPCL2B2RXH8 293 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 HNRNPCL3B7ZW38 293 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 K7EM74 188 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 DNAJA2O60884 412 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 NEURL1O76050 574 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 BCHEP06276 602 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 CHRM4P08173 479 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 FAM87AP0C7U9 286 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 HNRNPCL4P0DMR1 293 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 CYP4B1P13584 511 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 GSK3BP49841 420 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 HPCAP84074 193 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 CHRNEQ04844 493 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 SCARB2Q14108 478 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 OR1C1Q15619 314 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 GPR68Q15743 365 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 SPATS1Q496A3 300 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 DNAL1Q4LDG9 190 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 SAMD4BQ5PRF9 694 aaKnown RBP14.31□□□□□ -0.12
CNN1-202ENST00000535659 SLC22A10Q63ZE4 541 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 TYW3Q6IPR3 259 aaKnown RBP14.31□□□□□ -0.12
CNN1-202ENST00000535659 REEP3Q6NUK4 255 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 ERICH5Q6P6B1 374 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 BNC2Q6ZN30 1099 aaPredicted RBP14.31□□□□□ -0.12
CNN1-202ENST00000535659 OLIG3Q7RTU3 272 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 ARHGAP24Q8N264 748 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 GOLM1Q8NBJ4 401 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 CATSPER1Q8NEC5 780 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 OR10G3Q8NGC4 313 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 NFKBIDQ8NI38 313 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 PMM1Q92871 262 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 TMEM19Q96HH6 336 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 SIGLEC12Q96PQ1 595 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 SECISBP2Q96T21 854 aaKnown RBP14.31□□□□□ -0.12
CNN1-202ENST00000535659 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.31□□□□□ -0.12
CNN1-202ENST00000535659 SLC38A1Q9H2H9 487 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 ALG2Q9H553 416 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 BCL2L10Q9HD36 194 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 UBQLN4Q9NRR5 601 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 CD300AQ9UGN4 299 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 LHX6Q9UPM6 363 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 USP22Q9UPT9 525 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 WDR45Q9Y484 360 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 PKD1L2Q7Z442 2459 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 ELOVL7A1L3X0 281 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 PRORSD1PA6NEY8 169 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 FAM220BPB1ANY3 271 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 PGM3O95394 542 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 UTS2O95399 124 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 PDGFAP04085 211 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 TBXA2RP21731 343 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 RPP38P78345 283 aaKnown RBP14.31□□□□□ -0.12
CNN1-202ENST00000535659 VEZF1Q14119 521 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 FLYWCH1Q4VC44 716 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 LACTB2Q53H82 288 aaPredicted RBP14.31□□□□□ -0.12
CNN1-202ENST00000535659 PRAMEF8Q5VWM4 474 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 PRAMEF7Q5VXH5 474 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 FRRS1Q6ZNA5 592 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 MDGA2Q7Z553 956 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 HPS6Q86YV9 775 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 SLC30A8Q8IWU4 369 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 RNF148Q8N7C7 305 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 HIPK4Q8NE63 616 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 OR4C3Q8NH37 302 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 SPPL2AQ8TCT8 520 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 PAQR8Q8TEZ7 354 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 NODALQ96S42 347 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 TREX2Q9BQ50 279 aaPredicted RBP14.31□□□□□ -0.12
CNN1-202ENST00000535659 RUBCNLQ9H714 662 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 SH2D2AQ9NP31 389 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 TIMMDC1Q9NPL8 285 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 CNIH4Q9P003 139 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 GMPR2Q9P2T1 348 aaKnown RBP14.31□□□□□ -0.12
CNN1-202ENST00000535659 PACSIN3Q9UKS6 424 aa14.31□□□□□ -0.12
CNN1-202ENST00000535659 PRPF19Q9UMS4 504 aaKnown RBP14.31□□□□□ -0.12
CNN1-202ENST00000535659 CHCHD2Q9Y6H1 151 aaPredicted RBP14.31□□□□□ -0.12
CNN1-202ENST00000535659 BSNQ9UPA5 3926 aa14.3□□□□□ -0.12
CNN1-202ENST00000535659 ATMQ13315 3056 aa14.3□□□□□ -0.12
CNN1-202ENST00000535659 GSC2O15499 205 aa14.3□□□□□ -0.12
CNN1-202ENST00000535659 ICOSLGO75144 302 aa14.3□□□□□ -0.12
CNN1-202ENST00000535659 ZIC2O95409 532 aaPredicted RBP14.3□□□□□ -0.12
CNN1-202ENST00000535659 TNFSF10P50591 281 aa14.3□□□□□ -0.12
CNN1-202ENST00000535659 ATP12AP54707 1039 aa14.3□□□□□ -0.12
CNN1-202ENST00000535659 CEACAM7Q14002 265 aa14.3□□□□□ -0.12
CNN1-202ENST00000535659 GRAMD1BQ3KR37 738 aa14.3□□□□□ -0.12
CNN1-202ENST00000535659 ASB18Q6ZVZ8 466 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 310.8 ms