RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 OR10G6Q8NH81 332 aa6.95□□□□□ -1.3
PDGFC-203ENST00000502773 TMEM163Q8TC26 289 aa6.95□□□□□ -1.3
PDGFC-203ENST00000502773 SLC2A12Q8TD20 617 aa6.95□□□□□ -1.3
PDGFC-203ENST00000502773 SGCDQ92629 289 aa6.95□□□□□ -1.3
PDGFC-203ENST00000502773 COL26A1Q96A83 441 aa6.95□□□□□ -1.3
PDGFC-203ENST00000502773 ZDHHC12Q96GR4 267 aa6.95□□□□□ -1.3
PDGFC-203ENST00000502773 TSSK6Q9BXA6 273 aa6.95□□□□□ -1.3
PDGFC-203ENST00000502773 XKR8Q9H6D3 395 aa6.95□□□□□ -1.3
PDGFC-203ENST00000502773 DUX4Q9UBX2 424 aa6.95□□□□□ -1.3
PDGFC-203ENST00000502773 PRR23D1E9PI22 279 aaPredicted RBP6.94□□□□□ -1.3
PDGFC-203ENST00000502773 PRKYO43930 277 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 TMPRSS11DO60235 418 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 PLOD3O60568 738 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 PTTG1O95997 202 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 SLC35E2P0CK97 266 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 PRR23D2P0DMB1 279 aaPredicted RBP6.94□□□□□ -1.3
PDGFC-203ENST00000502773 ACP2P11117 423 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 BMP8BP34820 402 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 RBM34P42696 430 aaKnown RBP6.94□□□□□ -1.3
PDGFC-203ENST00000502773 LIMS1P48059 325 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 SLC14A1Q13336 389 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 HTR4Q13639 388 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 SHHQ15465 462 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 MINDY4Q4G0A6 757 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 IER5LQ5T953 404 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 C12orf73Q69YU5 71 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 MZT2BQ6NZ67 158 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 ZNF613Q6PF04 617 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 VN1R5Q7Z5H4 357 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 BMP8AQ7Z5Y6 402 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 SLITRK4Q8IW52 837 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 CSNK1A1LQ8N752 337 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 MYLIPQ8WY64 445 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 FAM3CQ92520 227 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 KLK6Q92876 244 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 TCTN2Q96GX1 697 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 ARHGDIGQ99819 225 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 CTRCQ99895 268 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 SEMA6CQ9H3T2 930 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 MKKSQ9NPJ1 570 aaPredicted RBP6.94□□□□□ -1.3
PDGFC-203ENST00000502773 CPNE7Q9UBL6 633 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 CDH10Q9Y6N8 788 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 LOC100506127A0A0U1RQW1 187 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 TMEM129A0AVI4 362 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 OR6C74A6NCV1 312 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 SLC22A31A6NKX4 558 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 PRSS44E7EML9 344 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 STK25O00506 426 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 IL1AP01583 271 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 GALNSP34059 522 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 FEN1P39748 380 aaKnown RBP6.94□□□□□ -1.3
PDGFC-203ENST00000502773 CBX5P45973 191 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 RAB8AP61006 207 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 HTRA3P83110 453 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 BDH1Q02338 343 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 HYAL1Q12794 435 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 PPP1R8Q12972 351 aaKnown RBP6.94□□□□□ -1.3
PDGFC-203ENST00000502773 TCTN3Q6NUS6 607 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 OR10Q1Q8NGQ4 319 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 OR4C6Q8NH72 309 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 C15orf40Q8WUR7 153 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 LGR4Q9BXB1 951 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 MCOLN1Q9GZU1 580 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 KLHL31Q9H511 634 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 CERS4Q9HA82 394 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 MCCC2Q9HCC0 563 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 TEX10Q9NXF1 929 aaPredicted RBP6.94□□□□□ -1.3
PDGFC-203ENST00000502773 PFDN2Q9UHV9 154 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 KLHL21Q9UJP4 597 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 TCRBV21S2A2A0A5A6 115 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 K7EQS6 105 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 CDK2AP1O14519 115 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 PCDH17O14917 1159 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 PRICKLE3O43900 615 aaPredicted RBP6.94□□□□□ -1.3
PDGFC-203ENST00000502773 GASTP01350 101 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 UGT2B7P16662 529 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 SLC6A6P31641 620 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 GP2P55259 537 aaKnown RBP6.94□□□□□ -1.3
PDGFC-203ENST00000502773 DCAF7P61962 342 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 SCN1BQ07699 218 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 CD300CQ08708 224 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 ZNF155Q12901 538 aaPredicted RBP6.94□□□□□ -1.3
PDGFC-203ENST00000502773 GPR68Q15743 365 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 TPRG1LQ5T0D9 272 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 PDZK1Q5T2W1 519 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 DDI2Q5TDH0 399 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 MFSD12Q6NUT3 480 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 PGBD2Q6P3X8 592 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 METAP1DQ6UB28 335 aaPredicted RBP6.94□□□□□ -1.3
PDGFC-203ENST00000502773 TMEM107Q6UX40 140 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 Q6ZSR6 202 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 MBOAT2Q6ZWT7 520 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 FAM124AQ86V42 546 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 PARGQ86W56 976 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 RAB43Q86YS6 212 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 B3GNT7Q8NFL0 401 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 REV1Q9UBZ9 1251 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 DAPP1Q9UN19 280 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 GRIP1Q9Y3R0 1128 aa6.94□□□□□ -1.3
PDGFC-203ENST00000502773 TTLL8A6PVC2 850 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms