RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 AQP1P29972 269 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 CYB561P49447 251 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 TMED10P49755 219 aaKnown RBP15.81■□□□□ 0.12
LIME1-208ENST00000493265 GSK3BP49841 420 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 HLCSP50747 726 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 PSMD4P55036 377 aaKnown RBP15.81■□□□□ 0.12
LIME1-208ENST00000493265 CDK6Q00534 326 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 TLE1Q04724 770 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 SCARB2Q14108 478 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 ADRM1Q16186 407 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 COLEC12Q5KU26 742 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 HEPHL1Q6MZM0 1159 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 PTRH1Q86Y79 214 aaKnown RBP15.81■□□□□ 0.12
LIME1-208ENST00000493265 PTOV1Q86YD1 416 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 FAM156AQ8NDB6 213 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 CHDHQ8NE62 594 aaPredicted RBP15.81■□□□□ 0.12
LIME1-208ENST00000493265 OR2T12Q8NG77 320 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 OR10G3Q8NGC4 313 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 DIO2Q92813 273 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 ABHD17AQ96GS6 310 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 TMEM19Q96HH6 336 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 ZNF583Q96ND8 569 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 KCTD14Q9BQ13 255 aaPredicted RBP15.81■□□□□ 0.12
LIME1-208ENST00000493265 BTBD10Q9BSF8 475 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 G6PC3Q9BUM1 346 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.81■□□□□ 0.12
LIME1-208ENST00000493265 SLC25A18Q9H1K4 315 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 A4GALTQ9NPC4 353 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 THUMPD1Q9NXG2 353 aaKnown RBP15.81■□□□□ 0.12
LIME1-208ENST00000493265 FLRT3Q9NZU0 649 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 LRFN1Q9P244 771 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 TMEM181Q9P2C4 612 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 LIPT1Q9Y234 373 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 GSTA4O15217 222 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 HS6ST1O60243 411 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 TSPAN2O60636 221 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 HNRNPCL1O60812 293 aaKnown RBP15.8■□□□□ 0.12
LIME1-208ENST00000493265 STX11O75558 287 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 PDE5AO76074 875 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 UTS2O95399 124 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 AK1P00568 194 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 ARAFP10398 606 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 BMP2P12643 396 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 MSX2P35548 267 aaPredicted RBP15.8■□□□□ 0.12
LIME1-208ENST00000493265 GZMMP51124 257 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 EEFSECP57772 596 aaKnown RBP15.8■□□□□ 0.12
LIME1-208ENST00000493265 CHRNEQ04844 493 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 KCNAB2Q13303 367 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 OR1C1Q15619 314 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 ZNF791Q3KP31 576 aaPredicted RBP15.8■□□□□ 0.12
LIME1-208ENST00000493265 FLYWCH1Q4VC44 716 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 SPINK14Q6IE38 97 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 SERPINA11Q86U17 422 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 CALHM3Q86XJ0 350 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 ZNF614Q8N883 585 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 C11orf65Q8NCR3 313 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 CATSPER1Q8NEC5 780 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 FAM110BQ8TC76 370 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 CLPTM1LQ96KA5 538 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 SIGLEC12Q96PQ1 595 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 TRNT1Q96Q11 434 aaKnown RBP15.8■□□□□ 0.12
LIME1-208ENST00000493265 SMAD5Q99717 465 aaKnown RBP15.8■□□□□ 0.12
LIME1-208ENST00000493265 THTPAQ9BU02 230 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 ALG2Q9H553 416 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 RUBCNLQ9H714 662 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 ABCD2Q9UBJ2 740 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 AP3M1Q9Y2T2 418 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 WDR45Q9Y484 360 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 PCDHGA9Q9Y5G4 932 aaKnown RBP15.8■□□□□ 0.12
LIME1-208ENST00000493265 CPAMD8Q8IZJ3 1885 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 FLNCQ14315 2725 aa15.8■□□□□ 0.12
LIME1-208ENST00000493265 TNRC6AQ8NDV7 1962 aaKnown RBP15.79■□□□□ 0.12
LIME1-208ENST00000493265 OR5H15A6NDH6 313 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 OR6C70A6NIJ9 312 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 FAM220BPB1ANY3 271 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 G3V3Y1 287 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 TP53I11O14683 189 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 ICOSLGO75144 302 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 PDGFAP04085 211 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 NAGAP17050 411 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 RASSF2P50749 326 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 CRISP3P54108 245 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 PNLIPRP2P54317 469 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 NCALDP61601 193 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 PSPHP78330 225 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 SRSF1Q07955 248 aaKnown RBP eCLIP15.79■□□□□ 0.12
LIME1-208ENST00000493265 EFR3AQ14156 821 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 GNA13Q14344 377 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 MAPK11Q15759 364 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 NTRK2Q16620 822 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 ZNF630Q2M218 657 aaPredicted RBP15.79■□□□□ 0.12
LIME1-208ENST00000493265 VMACQ2NL98 169 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 GRAMD1BQ3KR37 738 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 DNAL1Q4LDG9 190 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 SAMD4BQ5PRF9 694 aaKnown RBP15.79■□□□□ 0.12
LIME1-208ENST00000493265 PRAMEF20Q5VT98 475 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 RTL4Q6ZR62 310 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 NUP54Q7Z3B4 507 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 MDGA2Q7Z553 956 aa15.79■□□□□ 0.12
LIME1-208ENST00000493265 NET1Q7Z628 596 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms