RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 WDSUB1Q8N9V3 476 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 UBTD2Q8WUN7 234 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 OTUB2Q96DC9 234 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 CLSTN3Q9BQT9 956 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 PAAF1Q9BRP4 392 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 BRF2Q9HAW0 419 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 IL26Q9NPH9 171 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 NDRG3Q9UGV2 375 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 SH2B3Q9UQQ2 575 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 PTPRFP10586 1907 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 OR1F1O43749 312 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 UBXN7O94888 489 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 RPP14O95059 124 aaKnown RBP10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 GIPP09681 153 aaPredicted RBP10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 UCHL1P09936 223 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 ZNF30P17039 623 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 HNF1BP35680 557 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 GPR1P46091 355 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 ART1P52961 327 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 GLYR1Q49A26 553 aaPredicted RBP10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 ZNF627Q7L945 461 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 ZNF227Q86WZ6 799 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 OR1M1Q8NGA1 313 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 CRB3Q9BUF7 120 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 MIXL1Q9H2W2 232 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 OR2S2Q9NQN1 319 aa10.66□□□□□ -0.7
CRNKL1-204ENST00000490910 FER1L6Q2WGJ9 1857 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 OR5K3A6NET4 321 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 ACOT7O00154 380 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 CASC3O15234 703 aaKnown RBP10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 GPR32O75388 356 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 SYPP08247 313 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 HBQ1P09105 142 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 HPGDP15428 266 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 BPIP17213 487 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 IDSP22304 550 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 DEFA6Q01524 100 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 GAB1Q13480 694 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 PON3Q15166 354 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 FAM122BQ7Z309 247 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 LRRTM3Q86VH5 581 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 CHST4Q8NCG5 386 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 CASTOR1Q8WTX7 329 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 EGLN3Q9H6Z9 239 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 PRSS21Q9Y6M0 314 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 AGAP14A8MT82 685 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 ELFN1P0C7U0 828 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 AOAHP28039 575 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 BMP8BP34820 402 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 PREPP48147 710 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 PUM1Q14671 1186 aaKnown RBP eCLIP10.65□□□□□ -0.72e-6■■□□□ 14.5
CRNKL1-204ENST00000490910 GPR162Q16538 588 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 UPP1Q16831 310 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 EIPR1Q53HC9 387 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 PDSS1Q5T2R2 415 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 KCTD9Q7L273 389 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 BMP8AQ7Z5Y6 402 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 OR1J4Q8NGS1 313 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 NANPQ8TBE9 248 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 C2CD4CQ8TF44 421 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 SYT17Q9BSW7 474 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 TRMT61BQ9BVS5 477 aaKnown RBP10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 SLC38A1Q9H2H9 487 aa10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 PLEKHB1Q9UF11 243 aaPredicted RBP10.65□□□□□ -0.7
CRNKL1-204ENST00000490910 DPM1O60762 260 aa10.65□□□□□ -0.71
CRNKL1-204ENST00000490910 C1GALT1C1LP0DN25 315 aa10.65□□□□□ -0.71
CRNKL1-204ENST00000490910 PSMA3P25788 255 aa10.65□□□□□ -0.71
CRNKL1-204ENST00000490910 GKP32189 559 aa10.65□□□□□ -0.71
CRNKL1-204ENST00000490910 MRPS10P82664 201 aaKnown RBP10.65□□□□□ -0.71
CRNKL1-204ENST00000490910 PCGF3Q3KNV8 242 aa10.65□□□□□ -0.71
CRNKL1-204ENST00000490910 PRAMEF14Q5SWL7 426 aa10.65□□□□□ -0.71
CRNKL1-204ENST00000490910 ATCAYQ86WG3 371 aa10.65□□□□□ -0.71
CRNKL1-204ENST00000490910 LIX1LQ8IVB5 337 aa10.65□□□□□ -0.71
CRNKL1-204ENST00000490910 SETD7Q8WTS6 366 aaKnown RBP10.65□□□□□ -0.71
CRNKL1-204ENST00000490910 FATE1Q969F0 183 aa10.65□□□□□ -0.71
CRNKL1-204ENST00000490910 S100A13Q99584 98 aa10.65□□□□□ -0.71
CRNKL1-204ENST00000490910 ATF6BQ99941 703 aa10.65□□□□□ -0.71
CRNKL1-204ENST00000490910 C1QTNF6Q9BXI9 259 aa10.65□□□□□ -0.71
CRNKL1-204ENST00000490910 SLC6A20Q9NP91 592 aa10.65□□□□□ -0.71
CRNKL1-204ENST00000490910 ZSCAN32Q9NX65 697 aa10.65□□□□□ -0.71
CRNKL1-204ENST00000490910 FBXW2Q9UKT8 454 aa10.65□□□□□ -0.71
CRNKL1-204ENST00000490910 MEIS3P2A8K0S8 358 aa10.64□□□□□ -0.71
CRNKL1-204ENST00000490910 ADAM12O43184 909 aa10.64□□□□□ -0.71
CRNKL1-204ENST00000490910 PPM1BO75688 479 aa10.64□□□□□ -0.71
CRNKL1-204ENST00000490910 TACSTD2P09758 323 aa10.64□□□□□ -0.71
CRNKL1-204ENST00000490910 ITGB7P26010 798 aa10.64□□□□□ -0.71
CRNKL1-204ENST00000490910 SOX2P48431 317 aa10.64□□□□□ -0.71
CRNKL1-204ENST00000490910 ZNF628Q5EBL2 1059 aa10.64□□□□□ -0.71
CRNKL1-204ENST00000490910 CHST9Q7L1S5 443 aa10.64□□□□□ -0.71
CRNKL1-204ENST00000490910 L3MBTL4Q8NA19 623 aa10.64□□□□□ -0.71
CRNKL1-204ENST00000490910 SUN3Q8TAQ9 357 aa10.64□□□□□ -0.71
CRNKL1-204ENST00000490910 UPF1Q92900 1129 aaKnown RBP eCLIP10.64□□□□□ -0.71
CRNKL1-204ENST00000490910 GPR137Q96N19 417 aa10.64□□□□□ -0.71
CRNKL1-204ENST00000490910 SUV39H2Q9H5I1 410 aa10.64□□□□□ -0.71
CRNKL1-204ENST00000490910 HMX1Q9NP08 348 aaPredicted RBP10.64□□□□□ -0.71
CRNKL1-204ENST00000490910 FAM183AA6NL82 134 aa10.64□□□□□ -0.71
CRNKL1-204ENST00000490910 DUXAA6NLW8 204 aa10.64□□□□□ -0.71
CRNKL1-204ENST00000490910 C2orf74A8MZ97 194 aa10.64□□□□□ -0.71
CRNKL1-204ENST00000490910 AIPO00170 330 aa10.64□□□□□ -0.71
CRNKL1-204ENST00000490910 PRH1P02810 166 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms