RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 SMAD1Q15797 465 aaKnown RBP5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 NDUFAF6Q330K2 333 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 CYBRD1Q53TN4 286 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 FAM74A1Q5RGS3 127 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 PRAMEF19Q5SWL8 479 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 DCAF12L1Q5VU92 463 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 FBXW9Q5XUX1 488 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 FAHD2BQ6P2I3 314 aaPredicted RBP5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 DENND1BQ6P3S1 775 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 VWA1Q6PCB0 445 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 C3P1Q6ZMU1 363 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 CYS1Q717R9 158 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 MYPOPQ86VE0 399 aaPredicted RBP5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 NUDT13Q86X67 352 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 MISPQ8IVT2 679 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 SCN4BQ8IWT1 228 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 AQP12AQ8IXF9 295 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 PDZD9Q8IXQ8 264 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 SLC22A15Q8IZD6 547 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 GUF1Q8N442 669 aaKnown RBP5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 DUSP18Q8NEJ0 188 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 CHST13Q8NET6 341 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 OR6J1Q8NGC5 347 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 OR52M1Q8NGK5 317 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 OR1N1Q8NGS0 311 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 OR5K1Q8NHB7 308 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 C9orf43Q8TAL5 461 aaPredicted RBP5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 C2CD4CQ8TF44 421 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 SCARB1Q8WTV0 552 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 PIH1D2Q8WWB5 315 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 OSTF1Q92882 214 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 C3orf49Q96BT1 292 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 MRPS24Q96EL2 167 aaKnown RBP5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 FAHD2AQ96GK7 314 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 MARS2Q96GW9 593 aaKnown RBP5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 FBXL20Q96IG2 436 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 COQ10AQ96MF6 247 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 WDFY2Q96P53 400 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 GAL3ST4Q96RP7 486 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 SDHCQ99643 169 aaPredicted RBP5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 RBBP8Q99708 897 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 CPNE1Q99829 537 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 AGPAT1Q99943 283 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 MRPL13Q9BYD1 178 aaKnown RBP5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 EGLN1Q9GZT9 426 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 MFFQ9GZY8 342 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 EVA1AQ9H8M9 152 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 WDR41Q9HAD4 459 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 TREX1Q9NSU2 369 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 FAM212BQ9NTI7 297 aaPredicted RBP5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 NLE1Q9NVX2 485 aaPredicted RBP5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 CALML5Q9NZT1 146 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 DHCR7Q9UBM7 475 aaKnown RBP5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 ADAM28Q9UKQ2 775 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 PADI2Q9Y2J8 665 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 RGPD2P0DJD1 1756 aa5.62□□□□□ -1.51
ECHDC1-215ENST00000475319 KLF18A0A0U1RQI7 1052 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 A0A1W2PPM1 405 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 CDRT15L2A8MXV6 281 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 UBE2Q2LH0YL09 131 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 AP4M1O00189 453 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 CCSO14618 274 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 TP53I11O14683 189 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 EPHB6O15197 1021 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 FABP7O15540 132 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 MED7O43513 233 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 PRAMEF2O60811 474 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 VPS26AO75436 327 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 GLCEO94923 617 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 TNFRSF6BO95407 300 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 NTSR2O95665 410 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 HPRP00739 348 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 MMP1P03956 469 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 MELTFP08582 738 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 NMBP08949 121 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 OR2T7P0C7T2 308 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 TMIGD3P0DMS9 266 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 G6PDP11413 515 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 ERCC2P18074 760 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 CD72P21854 359 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 LHCGRP22888 699 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 IVDP26440 423 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 ELK4P28324 431 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 RABIFP47224 123 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 NRIP1P48552 1158 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 CEBPDP49716 269 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 NUMBP49757 651 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 RORCP51449 518 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 ZNF81P51508 661 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 CLDN8P56748 225 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 CLDN20P56880 219 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 MS4A2Q01362 244 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 TNFRSF17Q02223 184 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 SCGB2A2Q13296 93 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 GAB1Q13480 694 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 ITPK1Q13572 414 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 CEACAM7Q14002 265 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 BOP1Q14137 746 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 MEP1AQ16819 746 aa5.61□□□□□ -1.51
ECHDC1-215ENST00000475319 GOLGA7BQ2TAP0 167 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms