RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 FAM90A27PA6NNH2 459 aa20.9■□□□□ 0.94
PTPN4-208ENST00000460289 TOXO94900 526 aa20.9■□□□□ 0.94
PTPN4-208ENST00000460289 ALOX5P09917 674 aa20.9■□□□□ 0.94
PTPN4-208ENST00000460289 CPN1P15169 458 aa20.9■□□□□ 0.94
PTPN4-208ENST00000460289 ADH7P40394 386 aa20.9■□□□□ 0.94
PTPN4-208ENST00000460289 DSCR4P56555 118 aaPredicted RBP20.9■□□□□ 0.94
PTPN4-208ENST00000460289 AAGABQ6PD74 315 aa20.9■□□□□ 0.94
PTPN4-208ENST00000460289 LACC1Q8IV20 430 aa20.9■□□□□ 0.94
PTPN4-208ENST00000460289 LRRC34Q8IZ02 419 aa20.9■□□□□ 0.94
PTPN4-208ENST00000460289 SLC16A11Q8NCK7 471 aa20.9■□□□□ 0.94
PTPN4-208ENST00000460289 PSMA8Q8TAA3 256 aa20.9■□□□□ 0.94
PTPN4-208ENST00000460289 RMND5BQ96G75 393 aaPredicted RBP20.9■□□□□ 0.94
PTPN4-208ENST00000460289 DUSP26Q9BV47 211 aa20.9■□□□□ 0.94
PTPN4-208ENST00000460289 ENKD1Q9H0I2 346 aa20.9■□□□□ 0.94
PTPN4-208ENST00000460289 PTGES2Q9H7Z7 377 aa20.9■□□□□ 0.94
PTPN4-208ENST00000460289 HHATLQ9HCP6 504 aa20.9■□□□□ 0.94
PTPN4-208ENST00000460289 SIRT3Q9NTG7 399 aaPredicted RBP20.9■□□□□ 0.94
PTPN4-208ENST00000460289 SNX8Q9Y5X2 465 aa20.9■□□□□ 0.94
PTPN4-208ENST00000460289 CACNA1CQ13936 2221 aa20.9■□□□□ 0.94
PTPN4-208ENST00000460289 TEX15Q9BXT5 2789 aa20.89■□□□□ 0.93
PTPN4-208ENST00000460289 NKX2-6A6NCS4 301 aa20.89■□□□□ 0.93
PTPN4-208ENST00000460289 SOX30O94993 753 aa20.89■□□□□ 0.93
PTPN4-208ENST00000460289 UTS2O95399 124 aa20.89■□□□□ 0.93
PTPN4-208ENST00000460289 PRF1P14222 555 aa20.89■□□□□ 0.93
PTPN4-208ENST00000460289 DPP4P27487 766 aa20.89■□□□□ 0.93
PTPN4-208ENST00000460289 TIMP3P35625 211 aa20.89■□□□□ 0.93
PTPN4-208ENST00000460289 DIO3P55073 304 aa20.89■□□□□ 0.93
PTPN4-208ENST00000460289 WDR4P57081 412 aaKnown RBP20.89■□□□□ 0.93
PTPN4-208ENST00000460289 MAGOHP61326 146 aaKnown RBP20.89■□□□□ 0.93
PTPN4-208ENST00000460289 NSUN5P2Q63ZY6 315 aa20.89■□□□□ 0.93
PTPN4-208ENST00000460289 TRIM42Q8IWZ5 723 aa20.89■□□□□ 0.93
PTPN4-208ENST00000460289 ZPLD1Q8TCW7 415 aa20.89■□□□□ 0.93
PTPN4-208ENST00000460289 C16orf58Q96GQ5 468 aa20.89■□□□□ 0.93
PTPN4-208ENST00000460289 TBL1XR1Q9BZK7 514 aa20.89■□□□□ 0.93
PTPN4-208ENST00000460289 DSN1Q9H410 356 aa20.89■□□□□ 0.93
PTPN4-208ENST00000460289 CALHM2Q9HA72 323 aa20.89■□□□□ 0.93
PTPN4-208ENST00000460289 TMBIM4Q9HC24 238 aa20.89■□□□□ 0.93
PTPN4-208ENST00000460289 NKIRAS1Q9NYS0 192 aa20.89■□□□□ 0.93
PTPN4-208ENST00000460289 IL2RAP01589 272 aa20.88■□□□□ 0.93
PTPN4-208ENST00000460289 HMGN2P05204 90 aaKnown RBP20.88■□□□□ 0.93
PTPN4-208ENST00000460289 ACP2P11117 423 aa20.88■□□□□ 0.93
PTPN4-208ENST00000460289 CHMP24386 653 aa20.88■□□□□ 0.93
PTPN4-208ENST00000460289 CCT3P49368 545 aaKnown RBP20.88■□□□□ 0.93
PTPN4-208ENST00000460289 GFRA1P56159 465 aa20.88■□□□□ 0.93
PTPN4-208ENST00000460289 C17orf67Q0P5P2 114 aa20.88■□□□□ 0.93
PTPN4-208ENST00000460289 RCAN2Q14206 197 aa20.88■□□□□ 0.93
PTPN4-208ENST00000460289 PGS1Q32NB8 556 aa20.88■□□□□ 0.93
PTPN4-208ENST00000460289 SLC25A35Q3KQZ1 300 aa20.88■□□□□ 0.93
PTPN4-208ENST00000460289 SPDYE7PQ495Y7 208 aa20.88■□□□□ 0.93
PTPN4-208ENST00000460289 DCST1Q5T197 706 aa20.88■□□□□ 0.93
PTPN4-208ENST00000460289 SEM1Q6ZVN7 128 aa20.88■□□□□ 0.93
PTPN4-208ENST00000460289 GDF7Q7Z4P5 450 aa20.88■□□□□ 0.93
PTPN4-208ENST00000460289 CAMKMTQ7Z624 323 aa20.88■□□□□ 0.93
PTPN4-208ENST00000460289 MARCH3Q86UD3 253 aa20.88■□□□□ 0.93
PTPN4-208ENST00000460289 FADS6Q8N9I5 356 aa20.88■□□□□ 0.93
PTPN4-208ENST00000460289 ACBD4Q8NC06 268 aa20.88■□□□□ 0.93
PTPN4-208ENST00000460289 OR56A1Q8NGH5 318 aa20.88■□□□□ 0.93
PTPN4-208ENST00000460289 FAM110BQ8TC76 370 aa20.88■□□□□ 0.93
PTPN4-208ENST00000460289 DUSP19Q8WTR2 217 aa20.88■□□□□ 0.93
PTPN4-208ENST00000460289 MOAP1Q96BY2 351 aa20.88■□□□□ 0.93
PTPN4-208ENST00000460289 SFXN2Q96NB2 322 aa20.88■□□□□ 0.93
PTPN4-208ENST00000460289 G6PC3Q9BUM1 346 aa20.88■□□□□ 0.93
PTPN4-208ENST00000460289 NUF2Q9BZD4 464 aa20.88■□□□□ 0.93
PTPN4-208ENST00000460289 NEUROD4Q9HD90 331 aa20.88■□□□□ 0.93
PTPN4-208ENST00000460289 PNPOQ9NVS9 261 aa20.88■□□□□ 0.93
PTPN4-208ENST00000460289 THAP1Q9NVV9 213 aa20.88■□□□□ 0.93
PTPN4-208ENST00000460289 GIN1Q9NXP7 522 aa20.88■□□□□ 0.93
PTPN4-208ENST00000460289 FLRT3Q9NZU0 649 aa20.88■□□□□ 0.93
PTPN4-208ENST00000460289 CD8B2A6NJW9 211 aa20.87■□□□□ 0.93
PTPN4-208ENST00000460289 CFLARO15519 480 aa20.87■□□□□ 0.93
PTPN4-208ENST00000460289 ZIC3O60481 467 aa20.87■□□□□ 0.93
PTPN4-208ENST00000460289 KCNK2O95069 426 aa20.87■□□□□ 0.93
PTPN4-208ENST00000460289 C6orf47O95873 294 aa20.87■□□□□ 0.93
PTPN4-208ENST00000460289 IGKV1D-16P01601 117 aa20.87■□□□□ 0.93
PTPN4-208ENST00000460289 LBPP18428 481 aa20.87■□□□□ 0.93
PTPN4-208ENST00000460289 MSX1P28360 303 aa20.87■□□□□ 0.93
PTPN4-208ENST00000460289 LCN1P31025 176 aa20.87■□□□□ 0.93
PTPN4-208ENST00000460289 CEACAM8P31997 349 aaPredicted RBP20.87■□□□□ 0.93
PTPN4-208ENST00000460289 TFF3Q07654 80 aa20.87■□□□□ 0.93
PTPN4-208ENST00000460289 STX5Q13190 355 aa20.87■□□□□ 0.93
PTPN4-208ENST00000460289 GANABQ14697 944 aaKnown RBP20.87■□□□□ 0.93
PTPN4-208ENST00000460289 DUSP5Q16690 384 aa20.87■□□□□ 0.93
PTPN4-208ENST00000460289 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.87■□□□□ 0.93
PTPN4-208ENST00000460289 ATG16L1Q676U5 607 aa20.87■□□□□ 0.93
PTPN4-208ENST00000460289 BHLHB9Q6PI77 547 aa20.87■□□□□ 0.93
PTPN4-208ENST00000460289 MEX3BQ6ZN04 569 aaKnown RBP20.87■□□□□ 0.93
PTPN4-208ENST00000460289 COX18Q8N8Q8 333 aa20.87■□□□□ 0.93
PTPN4-208ENST00000460289 OR2M3Q8NG83 312 aa20.87■□□□□ 0.93
PTPN4-208ENST00000460289 FBXO30Q8TB52 745 aa20.87■□□□□ 0.93
PTPN4-208ENST00000460289 RAB3IL1Q8TBN0 382 aa20.87■□□□□ 0.93
PTPN4-208ENST00000460289 MGARPQ8TDB4 240 aa20.87■□□□□ 0.93
PTPN4-208ENST00000460289 NUDT8Q8WV74 236 aa20.87■□□□□ 0.93
PTPN4-208ENST00000460289 JADE3Q92613 823 aa20.87■□□□□ 0.93
PTPN4-208ENST00000460289 TLCD1Q96CP7 247 aa20.87■□□□□ 0.93
PTPN4-208ENST00000460289 TRIB1Q96RU8 372 aa20.87■□□□□ 0.93
PTPN4-208ENST00000460289 STACQ99469 402 aa20.87■□□□□ 0.93
PTPN4-208ENST00000460289 YIPF4Q9BSR8 244 aa20.87■□□□□ 0.93
PTPN4-208ENST00000460289 DPY30Q9C005 99 aa20.87■□□□□ 0.93
PTPN4-208ENST00000460289 MEAF6Q9HAF1 191 aa20.87■□□□□ 0.93
PTPN4-208ENST00000460289 DUSP22Q9NRW4 184 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms