RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 TNFSF15O95150 251 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 LDLRP01130 860 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 FABP3P05413 133 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 HEXBP07686 556 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 JMJD7P0C870 316 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 PABPC4LP0CB38 370 aaKnown RBP8.06□□□□□ -1.12
RIF1-208ENST00000457745 COX6A1P12074 109 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 ETS2P15036 469 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 WT1P19544 449 aaPredicted RBP8.06□□□□□ -1.12
RIF1-208ENST00000457745 IL10P22301 178 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 FASP25445 335 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 POLR2IP36954 125 aaKnown RBP8.06□□□□□ -1.12
RIF1-208ENST00000457745 LIMS1P48059 325 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 LIMK1P53667 647 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 CRISP3P54108 245 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 SLC26A5P58743 744 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 OCA2Q04671 838 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 Q0VFX4 171 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 GANABQ14697 944 aaKnown RBP8.06□□□□□ -1.12
RIF1-208ENST00000457745 SEC23BQ15437 767 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 TGIF1Q15583 401 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 CD226Q15762 336 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 FAM98BQ52LJ0 330 aaKnown RBP8.06□□□□□ -1.12
RIF1-208ENST00000457745 DCAF12Q5T6F0 453 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 FNDC7Q5VTL7 733 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 TCTN3Q6NUS6 607 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 FKBP9P1Q75LS8 142 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 PIWIL3Q7Z3Z3 882 aaKnown RBP8.06□□□□□ -1.12
RIF1-208ENST00000457745 CPEB2Q7Z5Q1 589 aaKnown RBP8.06□□□□□ -1.12
RIF1-208ENST00000457745 CYP4Z1Q86W10 505 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 ZNF619Q8N2I2 560 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 ZNF511Q8NB15 262 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 OR4C3Q8NH37 302 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 SNIP1Q8TAD8 396 aaKnown RBP8.06□□□□□ -1.12
RIF1-208ENST00000457745 CNOT9Q92600 299 aaKnown RBP8.06□□□□□ -1.12
RIF1-208ENST00000457745 EFHD2Q96C19 240 aaPredicted RBP8.06□□□□□ -1.12
RIF1-208ENST00000457745 CENPNQ96H22 339 aaPredicted RBP8.06□□□□□ -1.12
RIF1-208ENST00000457745 DEPDC7Q96QD5 511 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 ZNF300Q96RE9 604 aaPredicted RBP8.06□□□□□ -1.12
RIF1-208ENST00000457745 GAL3ST4Q96RP7 486 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 MBOAT4Q96T53 435 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 STACQ99469 402 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 PRRX2Q99811 253 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 FUZQ9BT04 418 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 DDA1Q9BW61 102 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 BTBD2Q9BX70 525 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 UGT2B28Q9BY64 529 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 SEMA4CQ9C0C4 833 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 STRADBQ9C0K7 418 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 WWTR1Q9GZV5 400 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 DUSP22Q9NRW4 184 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 C14orf105Q9NVL8 296 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 DNAJB9Q9UBS3 223 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 IL17BQ9UHF5 180 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 TMEFF2Q9UIK5 374 aaPredicted RBP8.06□□□□□ -1.12
RIF1-208ENST00000457745 RPS6KA6Q9UK32 745 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 A4GNTQ9UNA3 340 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 PPIEQ9UNP9 301 aaKnown RBP8.06□□□□□ -1.12
RIF1-208ENST00000457745 C15orf41Q9Y2V0 281 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 WDR45Q9Y484 360 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 PCDHGA3Q9Y5H0 932 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 EML6Q6ZMW3 1958 aa8.06□□□□□ -1.12
RIF1-208ENST00000457745 LOC102723996A0A087X1L8 192 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 A0A0G2JPF8 293 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 HNRNPCL2B2RXH8 293 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 HNRNPCL3B7ZW38 293 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 AP3D1O14617 1153 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 PCDH17O14917 1159 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 SLITRK5O94991 958 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 STAMBPO95630 424 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 LGI1O95970 557 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 CST1P01037 141 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 ALBP02768 609 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 ALPPP05187 535 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 HBQ1P09105 142 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 GKN3PP0CG01 181 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 HNRNPCL4P0DMR1 293 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 CYP4B1P13584 511 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 CSRP1P21291 193 aaKnown RBP8.05□□□□□ -1.12
RIF1-208ENST00000457745 RRM2P31350 389 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 PIGAP37287 484 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 MAGEA8P43361 318 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 NOVA1P51513 510 aaKnown RBP8.05□□□□□ -1.12
RIF1-208ENST00000457745 NR0B1P51843 470 aaKnown RBP8.05□□□□□ -1.12
RIF1-208ENST00000457745 EXOC3L2Q2M3D2 409 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 PDZK1Q5T2W1 519 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 C6orf52Q5T4I8 152 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 MRPL2Q5T653 305 aaKnown RBP8.05□□□□□ -1.12
RIF1-208ENST00000457745 INTS11Q5TA45 600 aaKnown RBP8.05□□□□□ -1.12
RIF1-208ENST00000457745 ATP1A1-AS1Q5TC04 95 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 OR2T5Q6IEZ7 315 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 BHLHB9Q6PI77 547 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 DHRS4L2Q6PKH6 230 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 KIRREL2Q6UWL6 708 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 C6orf15Q6UXA7 325 aaPredicted RBP8.05□□□□□ -1.12
RIF1-208ENST00000457745 WDR88Q6ZMY6 472 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 DEF8Q6ZN54 512 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 BPHLQ86WA6 291 aaPredicted RBP8.05□□□□□ -1.12
RIF1-208ENST00000457745 NLGN4XQ8N0W4 816 aa8.05□□□□□ -1.12
RIF1-208ENST00000457745 GATSQ8NAP1 163 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms