RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 SPOCK3Q9BQ16 436 aa12.79□□□□□ -0.36
RTFDC1-204ENST00000449062 FBXO34Q9NWN3 711 aa12.79□□□□□ -0.36
RTFDC1-204ENST00000449062 FAM120CQ9NX05 1096 aaKnown RBP12.79□□□□□ -0.36
RTFDC1-204ENST00000449062 ALKBH4Q9NXW9 302 aa12.79□□□□□ -0.36
RTFDC1-204ENST00000449062 COQ3Q9NZJ6 369 aa12.79□□□□□ -0.36
RTFDC1-204ENST00000449062 EIF3LQ9Y262 564 aaKnown RBP12.79□□□□□ -0.36
RTFDC1-204ENST00000449062 IGLV3-32A0A0A0MS00 114 aa12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 C15orf38-AP3S2A0A0A6YYH1 394 aa12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 ACTL6AO96019 429 aa12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 SRD5A2P31213 254 aa12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 EVI2BP34910 448 aa12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 GPC1P35052 558 aa12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 PRKAG1P54619 331 aa12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 MAD2L1Q13257 205 aaPredicted RBP12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 CASP8Q14790 479 aa12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 ZNHIT3Q15649 155 aaPredicted RBP12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 PDCD2Q16342 344 aaPredicted RBP12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 DUSP5Q16690 384 aa12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 ACSF3Q4G176 576 aaPredicted RBP12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 RIPPLY2Q5TAB7 128 aa12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 HHATQ5VTY9 493 aa12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 ZAR1Q86SH2 424 aa12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 ADGRE4PQ86SQ3 457 aa12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 MARCH3Q86UD3 253 aa12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 TRIM42Q8IWZ5 723 aa12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 NATD1Q8N6N6 113 aa12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 ANKRD42Q8N9B4 389 aa12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 OR2M3Q8NG83 312 aa12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 OR4C3Q8NH37 302 aa12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 ARL8AQ96BM9 186 aa12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 G6PC3Q9BUM1 346 aa12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 BHLHE41Q9C0J9 482 aaPredicted RBP12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 CXorf36Q9H7Y0 433 aa12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 MEAF6Q9HAF1 191 aa12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 C3orf14Q9HBI5 128 aa12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 EQTNQ9NQ60 294 aa12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 NPDC1Q9NQX5 325 aaPredicted RBP12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 GPATCH2Q9NW75 528 aa12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 GIN1Q9NXP7 522 aa12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 ABCG2Q9UNQ0 655 aa12.78□□□□□ -0.36
RTFDC1-204ENST00000449062 KCNK2O95069 426 aa12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 UTS2O95399 124 aa12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 C6orf47O95873 294 aa12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 HMGN2P05204 90 aaKnown RBP12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 NGFRP08138 427 aa12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 CCT3P49368 545 aaKnown RBP12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 PRR5P85299 388 aa12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 OCRLQ01968 901 aa12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 VPS26BQ4G0F5 336 aa12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 NSUN5P2Q63ZY6 315 aa12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 KIRREL3Q8IZU9 778 aa12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 NAXEQ8NCW5 288 aa12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 ZPLD1Q8TCW7 415 aa12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 GPR151Q8TDV0 419 aa12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 DUSP19Q8WTR2 217 aa12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 PPP1R36Q96LQ0 422 aa12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 MS4A4EQ96PG1 132 aa12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 UCN2Q96RP3 112 aa12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 PRPF18Q99633 342 aaKnown RBP12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 PAIP2Q9BPZ3 127 aaKnown RBP12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 DUSP26Q9BV47 211 aa12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 NUF2Q9BZD4 464 aa12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 TRIM8Q9BZR9 551 aa12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 DSN1Q9H410 356 aa12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 ATAD3AQ9NVI7 634 aa12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 THAP1Q9NVV9 213 aa12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 TAS2R10Q9NYW0 307 aa12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 NOP53Q9NZM5 478 aaKnown RBP12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 KCNE3Q9Y6H6 103 aa12.77□□□□□ -0.37
RTFDC1-204ENST00000449062 NKX2-6A6NCS4 301 aa12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 CD8B2A6NJW9 211 aa12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 ALG1L2C9J202 215 aa12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 SDHDO14521 159 aa12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 DDX5P17844 614 aaKnown RBP12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 TBXA2RP21731 343 aa12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 DPP4P27487 766 aa12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 TIMP3P35625 211 aa12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 ZFP36L2P47974 494 aaKnown RBP12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 STARP49675 285 aa12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 LHX2P50458 406 aa12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 PSMD4P55036 377 aaKnown RBP12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 HBA1P69905 142 aa12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 TOMM20Q15388 145 aa12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 GRAMD1BQ3KR37 738 aa12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 LSM12Q3MHD2 195 aaKnown RBP12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 OGFOD2Q6N063 350 aa12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 MCEMP1Q8IX19 187 aa12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 PM20D2Q8IYS1 436 aa12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 TNIP2Q8NFZ5 429 aa12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 OR8J2Q8NGG1 315 aa12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 OR10Q1Q8NGQ4 319 aa12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 SLC9A6Q92581 669 aa12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 RMND5BQ96G75 393 aaPredicted RBP12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 YIPF4Q9BSR8 244 aa12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 PIGUQ9H490 435 aa12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 CALHM2Q9HA72 323 aa12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 KCNJ16Q9NPI9 418 aa12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 DUSP22Q9NRW4 184 aa12.76□□□□□ -0.37
RTFDC1-204ENST00000449062 MED11Q9P086 117 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms