RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 IGSF5Q9NSI5 407 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 AIG1Q9NVV5 245 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 LOC100130705A0A1B0GUX0 176 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 A6NIZ1 184 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 TNFRSF10CO14798 259 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 ADH7P40394 386 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 RAP1BP61224 184 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 RAP1AP62834 184 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 SLC25A25Q6KCM7 469 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 OR5L1Q8NGL2 311 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 C9orf43Q8TAL5 461 aaPredicted RBP11.39□□□□□ -0.59
NEK1-201ENST00000439128 OR10A4Q9H209 315 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 C12orf49Q9H741 205 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 ANKRA2Q9H9E1 313 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 OR2T1O43869 369 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 APOL3O95236 402 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 PRKXP51817 358 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 TSTQ16762 297 aaKnown RBP11.39□□□□□ -0.59
NEK1-201ENST00000439128 PRAMEF17Q5VTA0 474 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 PGM2L1Q6PCE3 622 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 NRMQ8IXM6 262 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 PPP1R35Q8TAP8 253 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 ACOT12Q8WYK0 555 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 MAL2Q969L2 176 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 METTL2AQ96IZ6 378 aaKnown RBP11.39□□□□□ -0.59
NEK1-201ENST00000439128 HINT2Q9BX68 163 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 STOML2Q9UJZ1 356 aa11.39□□□□□ -0.59
NEK1-201ENST00000439128 ITGB4P16144 1822 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 POM121BA6NF01 834 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 FAM171A2A8MVW0 826 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 CKMT2P17540 419 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 PDE7AQ13946 482 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 EIF2B1Q14232 305 aaKnown RBP11.38□□□□□ -0.59
NEK1-201ENST00000439128 PIAS4Q8N2W9 510 aaPredicted RBP11.38□□□□□ -0.59
NEK1-201ENST00000439128 PRR18Q8N4B5 295 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 FBXL6Q8N531 539 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 ZNF615Q8N8J6 731 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 CCDC120Q96HB5 630 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 KAT8Q9H7Z6 458 aaKnown RBP11.38□□□□□ -0.59
NEK1-201ENST00000439128 CCDC187A0A096LP49 1063 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 SMAD9O15198 467 aaKnown RBP11.38□□□□□ -0.59
NEK1-201ENST00000439128 PPP1R3DO95685 299 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 TMEM225BP0DP42 221 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 CCR2P41597 374 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 PPP2CBP62714 309 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 PPP2CAP67775 309 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 FAM205BPQ63HN1 556 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 STEAP4Q687X5 459 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 OGFOD2Q6N063 350 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 SNX29P2Q8IUI4 249 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 SLC2A12Q8TD20 617 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 CNN2Q99439 309 aaKnown RBP11.38□□□□□ -0.59
NEK1-201ENST00000439128 UBQLN4Q9NRR5 601 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 SLC43A1O75387 559 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 DPP4P27487 766 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 GABRA2P47869 451 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 CCNJQ5T5M9 372 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 LETMD1Q6P1Q0 360 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 STON2Q8WXE9 905 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 SLC7A6OSQ96CW6 309 aaPredicted RBP11.38□□□□□ -0.59
NEK1-201ENST00000439128 IL20RAQ9UHF4 553 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 EXOSC1Q9Y3B2 195 aaKnown RBP11.38□□□□□ -0.59
NEK1-201ENST00000439128 KIAA0100Q14667 2235 aaKnown RBP11.38□□□□□ -0.59
NEK1-201ENST00000439128 PHIPQ8WWQ0 1821 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 ARHGAP33O14559 1287 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 DCTP40126 519 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 SH3BP2P78314 561 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 IL10RAQ13651 578 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 CTSL3PQ5NE16 218 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 NPRL2Q8WTW4 380 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 PAPPAQ13219 1627 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 NRAPQ86VF7 1730 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 ZCWPW2A0A1B0GU75 182 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 OR5K3A6NET4 321 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 CLPXO76031 633 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 CNOT4O95628 575 aaKnown RBP11.38□□□□□ -0.59
NEK1-201ENST00000439128 HLA-DPB1P04440 258 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 PVALBP20472 110 aaPredicted RBP11.38□□□□□ -0.59
NEK1-201ENST00000439128 CRABP1P29762 137 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 RPS5P46782 204 aaKnown RBP11.38□□□□□ -0.59
NEK1-201ENST00000439128 PSMD7P51665 324 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 TMEM196Q5HYL7 178 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 DUSP19Q8WTR2 217 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 IP6K3Q96PC2 410 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 ULBP2Q9BZM5 246 aa11.38□□□□□ -0.59
NEK1-201ENST00000439128 DDX60Q8IY21 1712 aaKnown RBP11.37□□□□□ -0.59
NEK1-201ENST00000439128 A0A1W2PPK0 400 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 SDHDO14521 159 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 TRIP6Q15654 476 aaKnown RBP11.37□□□□□ -0.59
NEK1-201ENST00000439128 NKAIN1Q4KMZ8 207 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 CDKL4Q5MAI5 379 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 USP43Q70EL4 1123 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 ANKK1Q8NFD2 765 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 PIGQQ9BRB3 760 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 PAPOLGQ9BWT3 736 aaKnown RBP11.37□□□□□ -0.59
NEK1-201ENST00000439128 TMEM202A6NGA9 273 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 MROH6A6NGR9 719 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 SLC33A1O00400 549 aaPredicted RBP11.37□□□□□ -0.59
NEK1-201ENST00000439128 CSF2P04141 144 aa11.37□□□□□ -0.59
NEK1-201ENST00000439128 HMGN2P05204 90 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms