RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 DHTKD1Q96HY7 919 aaPredicted RBP2.8□□□□□ -1.96
TRAPPC13-204ENST00000438419 TBC1D10AQ9BXI6 508 aa2.8□□□□□ -1.96
TRAPPC13-204ENST00000438419 TRIM9Q9C026 710 aa2.8□□□□□ -1.96
TRAPPC13-204ENST00000438419 RIBC2Q9H4K1 309 aa2.8□□□□□ -1.96
TRAPPC13-204ENST00000438419 LPAR2Q9HBW0 351 aa2.8□□□□□ -1.96
TRAPPC13-204ENST00000438419 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.8□□□□□ -1.96
TRAPPC13-204ENST00000438419 FARSBQ9NSD9 589 aaKnown RBP2.8□□□□□ -1.96
TRAPPC13-204ENST00000438419 AGPAT5Q9NUQ2 364 aa2.8□□□□□ -1.96
TRAPPC13-204ENST00000438419 PRR34Q9NV39 138 aa2.8□□□□□ -1.96
TRAPPC13-204ENST00000438419 DHRS4-AS1Q9P1J3 65 aa2.8□□□□□ -1.96
TRAPPC13-204ENST00000438419 ARMCX1Q9P291 453 aa2.8□□□□□ -1.96
TRAPPC13-204ENST00000438419 PRODH2Q9UF12 536 aa2.8□□□□□ -1.96
TRAPPC13-204ENST00000438419 RB1CC1Q8TDY2 1594 aa2.8□□□□□ -1.96
TRAPPC13-204ENST00000438419 IGLV3-10A0A075B6K4 115 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 TRAV9-2A0A087WT02 112 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 CCT8L1PA6NM43 557 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 CPLX1O14810 134 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 PHOX2AO14813 284 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 ZNF253O75346 499 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 IGHV3-9P01782 118 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 CSF2P04141 144 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 PVRP15151 417 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 NOVP48745 357 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 STK19P49842 368 aaPredicted RBP2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 HMGCS2P54868 508 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 SLC10A1Q14973 349 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 TAF7Q15545 349 aaPredicted RBP2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 CCDC57Q2TAC2 916 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 DCAF4L1Q3SXM0 396 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 OLFML2AQ68BL7 652 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 CBLN3Q6UW01 205 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 BTNL3Q6UXE8 466 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 FADS6Q8N9I5 356 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 STKLD1Q8NE28 680 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 ZPLD1Q8TCW7 415 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 VPS39Q96JC1 886 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 C4orf36Q96KX1 117 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 MCCC1Q96RQ3 725 aaPredicted RBP2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 MRPL13Q9BYD1 178 aaKnown RBP2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 NFKBIZQ9BYH8 718 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 COG4Q9H9E3 785 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 GPN2Q9H9Y4 310 aaPredicted RBP2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 CALHM2Q9HA72 323 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 POLD4Q9HCU8 107 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 TIGARQ9NQ88 270 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 FAM120CQ9NX05 1096 aaKnown RBP2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 AATFQ9NY61 560 aaKnown RBP eCLIP2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 UTP6Q9NYH9 597 aaKnown RBP2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 RAI14Q9P0K7 980 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 TMCC3Q9ULS5 477 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 BARX2Q9UMQ3 279 aaPredicted RBP2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 B9D1Q9UPM9 204 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 EXOSC1Q9Y3B2 195 aaKnown RBP2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 NAALAD2Q9Y3Q0 740 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 AP4B1Q9Y6B7 739 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 CCDC7Q96M83 1385 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 POGZQ7Z3K3 1410 aa2.79□□□□□ -1.96
TRAPPC13-204ENST00000438419 A0A1B0GWJ7 208 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 FAM74A7A6NL05 159 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 PPIHO43447 177 aaKnown RBP2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 JAK2O60674 1132 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 SRPX2O60687 465 aaPredicted RBP2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 RHBDL1O75783 438 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 IDH1O75874 414 aaKnown RBP2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 THY1P04216 161 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 ASNSP08243 561 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 ALPIP09923 528 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 ATP6V1C1P21283 382 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 IDSP22304 550 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 SOX6P35712 828 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 METAP1P53582 386 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 IST1P53990 364 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 RPS6P62753 249 aaKnown RBP2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 MAPK6Q16659 721 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 PPP1R3AQ16821 1122 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 TIMM50Q3ZCQ8 353 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 SLC22A6Q4U2R8 563 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 FAM74A3Q4VXF1 159 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 SCYL2Q6P3W7 929 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 ARL6IP6Q8N6S5 226 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 ZNF540Q8NDQ6 660 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 C11orf24Q96F05 449 aaPredicted RBP2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 PIWIL1Q96J94 861 aaKnown RBP2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 TESK2Q96S53 571 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 GPA33Q99795 319 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 SLC25A51Q9H1U9 297 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 DHX33Q9H6R0 707 aaKnown RBP2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 RBM28Q9NW13 759 aaKnown RBP2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 CHRNA9Q9UGM1 479 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 SNX6Q9UNH7 406 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 GRIN2DO15399 1336 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 RIMBP3CA6NJZ7 1639 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 RIMBP3BA6NNM3 1639 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 RIMBP3Q9UFD9 1639 aa2.78□□□□□ -1.96
TRAPPC13-204ENST00000438419 ERCC6L2Q5T890 1561 aa2.77□□□□□ -1.97
TRAPPC13-204ENST00000438419 TRBV7-9A0A0J9YWB2 115 aa2.77□□□□□ -1.97
TRAPPC13-204ENST00000438419 SAP18O00422 153 aaKnown RBP2.77□□□□□ -1.97
TRAPPC13-204ENST00000438419 PRAMEF12O95522 483 aa2.77□□□□□ -1.97
TRAPPC13-204ENST00000438419 IGKV3-15P01624 115 aa2.77□□□□□ -1.97
TRAPPC13-204ENST00000438419 SDC1P18827 310 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms