RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 PMS2CLQ68D20 193 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 MARCH3Q86UD3 253 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 ABHD11Q8NFV4 315 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 OR8K3Q8NH51 312 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 SLC22A8Q8TCC7 542 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 NSMAFQ92636 917 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 TMCO6Q96DC7 493 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 POLDIP3Q9BY77 421 aaKnown RBP10.64□□□□□ -0.71
SNX13-202ENST00000409604 NECTIN3Q9NQS3 549 aa10.64□□□□□ -0.71
SNX13-202ENST00000409604 KLK10O43240 276 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 NUDT21O43809 227 aaKnown RBP10.63□□□□□ -0.71
SNX13-202ENST00000409604 C1QCP02747 245 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 KCNJ10P78508 379 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 ZIC1Q15915 447 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 HES3Q5TGS1 186 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 METTL2BQ6P1Q9 378 aaKnown RBP10.63□□□□□ -0.71
SNX13-202ENST00000409604 LHFPL3Q86UP9 236 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 ZFP41Q8N8Y5 198 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 TESCQ96BS2 214 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 MTERF3Q96E29 417 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 CDCP1Q9H5V8 836 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 MED13LQ71F56 2210 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 TRAV27A0A087WT01 109 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 RAD1O60671 282 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 PUM1Q14671 1186 aaKnown RBP eCLIP10.63□□□□□ -0.71
SNX13-202ENST00000409604 SIMC1Q8NDZ2 872 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 ZFP90Q8TF47 636 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 MAELQ96JY0 434 aaKnown RBP10.63□□□□□ -0.71
SNX13-202ENST00000409604 Q96MT0 163 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 SFXN2Q96NB2 322 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 PIP5K1AQ99755 562 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 PAIP1Q9H074 479 aaKnown RBP10.63□□□□□ -0.71
SNX13-202ENST00000409604 DUSP15Q9H1R2 295 aaPredicted RBP10.63□□□□□ -0.71
SNX13-202ENST00000409604 NMNAT1Q9HAN9 279 aaPredicted RBP10.63□□□□□ -0.71
SNX13-202ENST00000409604 MED11Q9P086 117 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 B3GALT1Q9Y5Z6 326 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 KCNE3Q9Y6H6 103 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 CSNK1G3Q9Y6M4 447 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 FAM166BA8MTA8 275 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 KLK8O60259 260 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 CTNSO60931 367 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 UGT2B11O75310 529 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 ZFAND5O76080 213 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 STK17BO94768 372 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 KCNK5O95279 499 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 F13BP05160 661 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 ZNF823P16415 610 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 SELENOWP63302 87 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 RPP38P78345 283 aaKnown RBP10.63□□□□□ -0.71
SNX13-202ENST00000409604 LGALS3BPQ08380 585 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 TLR1Q15399 786 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 TGIF1Q15583 401 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 INAQ16352 499 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 FAM220AQ7Z4H9 259 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 OR8H2Q8N162 312 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 CHCHD4Q8N4Q1 142 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 LINC00471Q8N535 108 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 NODALQ96S42 347 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 ABCB9Q9NP78 766 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 ST14Q9Y5Y6 855 aa10.63□□□□□ -0.71
SNX13-202ENST00000409604 A0A075B6Q4 140 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 NPIPA5E9PKD4 350 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 HCRTR1O43613 425 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 RGS10O43665 173 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 PFDN1O60925 122 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 NPPAP01160 153 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 GNALP38405 381 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 DCTP40126 519 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 HNRNPFP52597 415 aaKnown RBP10.62□□□□□ -0.71
SNX13-202ENST00000409604 RBBP4Q09028 425 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 EEF1A1P5Q5VTE0 462 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 ENDOVQ8N8Q3 282 aaKnown RBP10.62□□□□□ -0.71
SNX13-202ENST00000409604 ZSCAN1Q8NBB4 408 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 THOC3Q96J01 351 aaKnown RBP10.62□□□□□ -0.71
SNX13-202ENST00000409604 PRDM4Q9UKN5 801 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 NPIPA1Q9UND3 350 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 PROM1O43490 865 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 HSD17B1P14061 328 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 GDF1P27539 372 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 GALK2Q01415 458 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 SGCAQ16586 387 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 ZNF595Q8IYB9 648 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 LAS2Q8IYD9 372 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 ADGRG5Q8IZF4 528 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 ZHX1-C8orf76Q96EF9 292 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 SLC41A3Q96GZ6 507 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 OR2A5Q96R48 311 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 CPPED1Q9BRF8 314 aaPredicted RBP10.62□□□□□ -0.71
SNX13-202ENST00000409604 ARMC1Q9NVT9 282 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 PLA2G3Q9NZ20 509 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 IFT52Q9Y366 437 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 DAPL1A0PJW8 107 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 ARNTLO00327 626 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 ABCB7O75027 752 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 POU3F3P20264 500 aaPredicted RBP10.62□□□□□ -0.71
SNX13-202ENST00000409604 GABREP78334 506 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 SVOPQ8N4V2 548 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 OR8J2Q8NGG1 315 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 MYDGFQ969H8 173 aa10.62□□□□□ -0.71
SNX13-202ENST00000409604 COQ8BQ96D53 544 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms