RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 SPATA2Q9UM82 520 aa9.52□□□□□ -0.89
HMGCLL1-205ENST00000398661 CORO2BQ9UQ03 480 aa9.52□□□□□ -0.89
HMGCLL1-205ENST00000398661 SLC27A6Q9Y2P4 619 aa9.52□□□□□ -0.89
HMGCLL1-205ENST00000398661 PRKAB1Q9Y478 270 aa9.52□□□□□ -0.89
HMGCLL1-205ENST00000398661 TRDV1A0A1B0GX56 115 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 TCRBV16S1A1N1A0A5B0 115 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 ARRDC5A6NEK1 342 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 SPINT1O43278 529 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 PCDH7O60245 1069 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 SOX14O95416 240 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 TGM6O95932 706 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 IFNA14P01570 189 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 NMBP08949 121 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 POU2F2P09086 479 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 NR2F6P10588 404 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 AMD1P17707 334 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 C4BPBP20851 252 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 PPIBP23284 216 aaKnown RBP9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 ITPKAP23677 461 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 MMP12P39900 470 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 CNTN1Q12860 1018 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 HEPACAMQ14CZ8 416 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 OCLNQ16625 522 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 GPR33Q49SQ1 333 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 TMEM196Q5HYL7 178 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 RAET1GQ6H3X3 334 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 ZNF770Q6IQ21 691 aaPredicted RBP9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 NOXRED1Q6NXP6 359 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 UNC5DQ6UXZ4 953 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 ZNF600Q6ZNG1 722 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 BVESQ8NE79 360 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 GANCQ8TET4 914 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 UBTD2Q8WUN7 234 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 GATAD2BQ8WXI9 593 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 HSD17B8Q92506 261 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 FOXJ1Q92949 421 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 P2RY12Q9H244 342 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 ASB8Q9H765 288 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 RHCGQ9UBD6 479 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 PCDHGA9Q9Y5G4 932 aaKnown RBP9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 NUP214P35658 2090 aaPredicted RBP9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 UPK3BL1B0FP48 263 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 UPK3BL2E5RIL1 263 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 ANHXE9PGG2 379 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 FAM227AF5H4B4 570 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 PDCD5O14737 125 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 PSMA3P25788 255 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 KIR2DL1P43626 348 aaPredicted RBP9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 PTPN5P54829 565 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 TSPAN5P62079 268 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 COL19A1Q14993 1142 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 LTB4RQ15722 352 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 CD200R1LQ6Q8B3 271 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 NLRC3Q7RTR2 1065 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 OR8J2Q8NGG1 315 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 OR8J1Q8NGP2 316 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 MOSPD2Q8NHP6 518 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 RPLP0P6Q8NHW5 317 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 LKAAEAR1Q8TD35 194 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 DPH7Q9BTV6 452 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 SARGQ9BW04 601 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 FOXQ1Q9C009 403 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 RNF32Q9H0A6 362 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 ISYNA1Q9NPH2 558 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 IMP3Q9NV31 184 aaKnown RBP9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 COA4Q9NYJ1 87 aa9.51□□□□□ -0.89
HMGCLL1-205ENST00000398661 SHISA3A0PJX4 238 aa9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 C1orf226A1L170 272 aa9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 H0YC42 278 aa9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 SSNA1O43805 119 aa9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 RGS11O94810 467 aa9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 OR5F1O95221 314 aa9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 PAPLNO95428 1278 aa9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 KLF8O95600 359 aaPredicted RBP9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 CBX7O95931 251 aa9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 LAMP1P11279 417 aa9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 XPAP23025 273 aaPredicted RBP9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 EPHA4P54764 986 aa9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 ZP1P60852 638 aa9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 RPS7P62081 194 aaKnown RBP9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 ILKQ13418 452 aa9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 GSG1Q2KHT4 349 aa9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 MPEG1Q2M385 716 aa9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 FAM209BQ5JX69 171 aa9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 CDKL4Q5MAI5 379 aa9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 TMEM92Q6UXU6 159 aa9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 TPRG1Q6ZUI0 275 aa9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 USP45Q70EL2 814 aa9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 KRT74Q7RTS7 529 aa9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 MARCH9Q86YJ5 346 aa9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 LILRA3Q8N6C8 439 aaPredicted RBP9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 BMPERQ8N8U9 685 aa9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 LMNTD1Q8N9Z9 388 aa9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 BEST4Q8NFU0 473 aa9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 HUS1BQ8NHY5 278 aa9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 CDC26Q8NHZ8 85 aa9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 COQ8AQ8NI60 647 aa9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 GEMIN6Q8WXD5 167 aaKnown RBP9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 ADAMTS14Q8WXS8 1223 aa9.5□□□□□ -0.89
HMGCLL1-205ENST00000398661 ECHDC3Q96DC8 303 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms