RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 NEURL3Q96EH8 262 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 ADAD1Q96M93 576 aaKnown RBP13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 ADOQ96SZ5 270 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 TMED9Q9BVK6 235 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 SEMA6CQ9H3T2 930 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 NT5DC2Q9H857 520 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 NANSQ9NR45 359 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 FGF21Q9NSA1 209 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 CUTCQ9NTM9 273 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 NKIRAS2Q9NYR9 191 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 ZNF222Q9UK12 451 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 TMPRSS11EQ9UL52 423 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 OTOFQ9HC10 1997 aa13.32□□□□□ -0.28
SHROOM1-203ENST00000378679 ANKRD33BA6NCL7 494 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 ZNF726A6NNF4 738 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 PPM1DO15297 605 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 PPM1BO75688 479 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 IL18Q14116 193 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 DSG2Q14126 1118 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 SFXN5Q8TD22 340 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 SGTBQ96EQ0 304 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 SP140LQ9H930 580 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 SEC61A2Q9H9S3 476 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 GRHPRQ9UBQ7 328 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 SRPK3Q9UPE1 567 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 PLD2O14939 933 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 POU2F2P09086 479 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 SDC2P34741 201 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 PUM1Q14671 1186 aaKnown RBP eCLIP13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 SGCBQ16585 318 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 PUS10Q3MIT2 529 aaKnown RBP13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 FRMPD2BQ6IN97 320 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 ALKBH2Q6NS38 261 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 ZCCHC12Q6PEW1 402 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 PLET1Q6UQ28 207 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 IL22RA1Q8N6P7 574 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 TTYH2Q9BSA4 534 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 ANKRA2Q9H9E1 313 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 TRPV4Q9HBA0 871 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 CKLFQ9UBR5 152 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 C2orf92A0A1B0GVN3 265 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 A8MVJ9 347 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 CDC40O60508 579 aaKnown RBP eCLIP13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 TRAPPC6AO75865 159 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 COL9A1P20849 921 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 DCKP27707 260 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 MNX1P50219 401 aaPredicted RBP13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 CCR5P51681 352 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 ZNF41P51814 821 aaPredicted RBP13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 MAP4K2Q12851 820 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 QPRTQ15274 297 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 PROX2Q3B8N5 592 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 ZNF385BQ569K4 471 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 RAB43Q86YS6 212 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 ZNF619Q8N2I2 560 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 OR5L2Q8NGL0 311 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 C11orf24Q96F05 449 aaPredicted RBP13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 NCDNQ9UBB6 729 aa13.31□□□□□ -0.28
SHROOM1-203ENST00000378679 A0A1W2PR48 441 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 AGAP14A8MT82 685 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 TRIM3O75382 744 aaPredicted RBP13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 CD2P06729 351 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 ADORA3P0DMS8 318 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 SPHARQ15513 63 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 TMEM92Q6UXU6 159 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 SYNPOQ8N3V7 929 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 OR5T3Q8NGG3 340 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 OR8H1Q8NGG4 311 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 OR51Q1Q8NH59 317 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 TRIM36Q9NQ86 728 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 SLC7A7Q9UM01 511 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 FAM227AF5H4B4 570 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 TP53I11O14683 189 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 RNF13O43567 381 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 FUCA1P04066 466 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 HLA-DPB1P04440 258 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 CD22P20273 847 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 OMPP47874 163 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 CD97P48960 835 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 FAM69BQ5VUD6 431 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 SLC16A11Q8NCK7 471 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 ZNF420Q8TAQ5 688 aaPredicted RBP13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 COQ8BQ96D53 544 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 DPH1Q9BZG8 443 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 COMMD4Q9H0A8 199 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 POU2F3Q9UKI9 436 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 PRELID1Q9Y255 219 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 A0A1W2PQ72 361 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 CDC14CA4D256 554 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 PROM1O43490 865 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 BMP1P13497 986 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 ACPPP15309 386 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 PGCP20142 388 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 CASRP41180 1078 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 ATP12AP54707 1039 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 THEM6Q8WUY1 208 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 ELP4Q96EB1 424 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 PRRC1Q96M27 445 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 ZNF559Q9BR84 538 aa13.3□□□□□ -0.28
SHROOM1-203ENST00000378679 TIGARQ9NQ88 270 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms