RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 WNT3P56703 355 aa18.67■□□□□ 0.58
SMNDC1-201ENST00000369592 CASP8Q14790 479 aa18.67■□□□□ 0.58
SMNDC1-201ENST00000369592 HHATQ5VTY9 493 aa18.67■□□□□ 0.58
SMNDC1-201ENST00000369592 APOOLQ6UXV4 268 aa18.67■□□□□ 0.58
SMNDC1-201ENST00000369592 YRDCQ86U90 279 aaKnown RBP18.67■□□□□ 0.58
SMNDC1-201ENST00000369592 ANKRD42Q8N9B4 389 aa18.67■□□□□ 0.58
SMNDC1-201ENST00000369592 PIK3R3Q92569 461 aa18.67■□□□□ 0.58
SMNDC1-201ENST00000369592 MARVELD3Q96A59 401 aa18.67■□□□□ 0.58
SMNDC1-201ENST00000369592 C16orf58Q96GQ5 468 aa18.67■□□□□ 0.58
SMNDC1-201ENST00000369592 BHLHE41Q9C0J9 482 aaPredicted RBP18.67■□□□□ 0.58
SMNDC1-201ENST00000369592 MEAF6Q9HAF1 191 aa18.67■□□□□ 0.58
SMNDC1-201ENST00000369592 C3orf14Q9HBI5 128 aa18.67■□□□□ 0.58
SMNDC1-201ENST00000369592 GIN1Q9NXP7 522 aa18.67■□□□□ 0.58
SMNDC1-201ENST00000369592 Q9UFV3 132 aa18.67■□□□□ 0.58
SMNDC1-201ENST00000369592 IGLV3-32A0A0A0MS00 114 aa18.66■□□□□ 0.58
SMNDC1-201ENST00000369592 KDM4EB2RXH2 506 aaPredicted RBP18.66■□□□□ 0.58
SMNDC1-201ENST00000369592 SCN2BO60939 215 aa18.66■□□□□ 0.58
SMNDC1-201ENST00000369592 EPPINO95925 133 aa18.66■□□□□ 0.58
SMNDC1-201ENST00000369592 ACTL6AO96019 429 aa18.66■□□□□ 0.58
SMNDC1-201ENST00000369592 DUSP5Q16690 384 aa18.66■□□□□ 0.58
SMNDC1-201ENST00000369592 ACSF3Q4G176 576 aaPredicted RBP18.66■□□□□ 0.58
SMNDC1-201ENST00000369592 RIPPLY2Q5TAB7 128 aa18.66■□□□□ 0.58
SMNDC1-201ENST00000369592 OGFOD2Q6N063 350 aa18.66■□□□□ 0.58
SMNDC1-201ENST00000369592 CA5BP1Q8WTZ4 195 aa18.66■□□□□ 0.58
SMNDC1-201ENST00000369592 ABTB1Q969K4 478 aaPredicted RBP18.66■□□□□ 0.58
SMNDC1-201ENST00000369592 CXorf36Q9H7Y0 433 aa18.66■□□□□ 0.58
SMNDC1-201ENST00000369592 EQTNQ9NQ60 294 aa18.66■□□□□ 0.58
SMNDC1-201ENST00000369592 ATAD3AQ9NVI7 634 aa18.66■□□□□ 0.58
SMNDC1-201ENST00000369592 GPATCH2Q9NW75 528 aa18.66■□□□□ 0.58
SMNDC1-201ENST00000369592 NGFRP08138 427 aa18.65■□□□□ 0.58
SMNDC1-201ENST00000369592 CPN1P15169 458 aa18.65■□□□□ 0.58
SMNDC1-201ENST00000369592 CEACAM8P31997 349 aaPredicted RBP18.65■□□□□ 0.58
SMNDC1-201ENST00000369592 PRKAG1P54619 331 aa18.65■□□□□ 0.58
SMNDC1-201ENST00000369592 B3GALT5-AS1P59052 145 aa18.65■□□□□ 0.58
SMNDC1-201ENST00000369592 PRR5P85299 388 aa18.65■□□□□ 0.58
SMNDC1-201ENST00000369592 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.65■□□□□ 0.58
SMNDC1-201ENST00000369592 VPS26BQ4G0F5 336 aa18.65■□□□□ 0.58
SMNDC1-201ENST00000369592 ZAR1Q86SH2 424 aa18.65■□□□□ 0.58
SMNDC1-201ENST00000369592 ADGRE4PQ86SQ3 457 aa18.65■□□□□ 0.58
SMNDC1-201ENST00000369592 LIX1LQ8IVB5 337 aa18.65■□□□□ 0.58
SMNDC1-201ENST00000369592 PM20D2Q8IYS1 436 aa18.65■□□□□ 0.58
SMNDC1-201ENST00000369592 OR2M3Q8NG83 312 aa18.65■□□□□ 0.58
SMNDC1-201ENST00000369592 RAB3IL1Q8TBN0 382 aa18.65■□□□□ 0.58
SMNDC1-201ENST00000369592 SPOCK3Q9BQ16 436 aa18.65■□□□□ 0.58
SMNDC1-201ENST00000369592 NUF2Q9BZD4 464 aa18.65■□□□□ 0.58
SMNDC1-201ENST00000369592 NPDC1Q9NQX5 325 aaPredicted RBP18.65■□□□□ 0.58
SMNDC1-201ENST00000369592 THAP1Q9NVV9 213 aa18.65■□□□□ 0.58
SMNDC1-201ENST00000369592 MRTO4Q9UKD2 239 aaKnown RBP18.65■□□□□ 0.58
SMNDC1-201ENST00000369592 MED12LQ86YW9 2145 aa18.65■□□□□ 0.58
SMNDC1-201ENST00000369592 SDHDO14521 159 aa18.64■□□□□ 0.57
SMNDC1-201ENST00000369592 KCNK2O95069 426 aa18.64■□□□□ 0.57
SMNDC1-201ENST00000369592 UTS2O95399 124 aa18.64■□□□□ 0.57
SMNDC1-201ENST00000369592 C6orf47O95873 294 aa18.64■□□□□ 0.57
SMNDC1-201ENST00000369592 HMGN2P05204 90 aaKnown RBP18.64■□□□□ 0.57
SMNDC1-201ENST00000369592 PSMD4P55036 377 aaKnown RBP18.64■□□□□ 0.57
SMNDC1-201ENST00000369592 PHC1P78364 1004 aa18.64■□□□□ 0.57
SMNDC1-201ENST00000369592 OCRLQ01968 901 aa18.64■□□□□ 0.57
SMNDC1-201ENST00000369592 AGBL2Q5U5Z8 902 aa18.64■□□□□ 0.57
SMNDC1-201ENST00000369592 OR5M10Q6IEU7 315 aa18.64■□□□□ 0.57
SMNDC1-201ENST00000369592 POMZP3Q6PJE2 187 aa18.64■□□□□ 0.57
SMNDC1-201ENST00000369592 ZNF295-AS1Q8N0V1 137 aa18.64■□□□□ 0.57
SMNDC1-201ENST00000369592 OR8J2Q8NGG1 315 aa18.64■□□□□ 0.57
SMNDC1-201ENST00000369592 SFXN5Q8TD22 340 aa18.64■□□□□ 0.57
SMNDC1-201ENST00000369592 GPR151Q8TDV0 419 aa18.64■□□□□ 0.57
SMNDC1-201ENST00000369592 ARL8AQ96BM9 186 aa18.64■□□□□ 0.57
SMNDC1-201ENST00000369592 RMND5BQ96G75 393 aaPredicted RBP18.64■□□□□ 0.57
SMNDC1-201ENST00000369592 PPP1R36Q96LQ0 422 aa18.64■□□□□ 0.57
SMNDC1-201ENST00000369592 STACQ99469 402 aa18.64■□□□□ 0.57
SMNDC1-201ENST00000369592 PRPF18Q99633 342 aaKnown RBP18.64■□□□□ 0.57
SMNDC1-201ENST00000369592 PAIP2Q9BPZ3 127 aaKnown RBP18.64■□□□□ 0.57
SMNDC1-201ENST00000369592 G6PC3Q9BUM1 346 aa18.64■□□□□ 0.57
SMNDC1-201ENST00000369592 DUSP26Q9BV47 211 aa18.64■□□□□ 0.57
SMNDC1-201ENST00000369592 UCK2Q9BZX2 261 aa18.64■□□□□ 0.57
SMNDC1-201ENST00000369592 DUSP22Q9NRW4 184 aa18.64■□□□□ 0.57
SMNDC1-201ENST00000369592 ZCCHC3Q9NUD5 404 aaKnown RBP18.64■□□□□ 0.57
SMNDC1-201ENST00000369592 FBXO34Q9NWN3 711 aa18.64■□□□□ 0.57
SMNDC1-201ENST00000369592 TAS2R10Q9NYW0 307 aa18.64■□□□□ 0.57
SMNDC1-201ENST00000369592 CD8B2A6NJW9 211 aa18.63■□□□□ 0.57
SMNDC1-201ENST00000369592 KCNH1O95259 989 aa18.63■□□□□ 0.57
SMNDC1-201ENST00000369592 LBPP18428 481 aa18.63■□□□□ 0.57
SMNDC1-201ENST00000369592 LCN1P31025 176 aa18.63■□□□□ 0.57
SMNDC1-201ENST00000369592 TIMP3P35625 211 aa18.63■□□□□ 0.57
SMNDC1-201ENST00000369592 ZFP36L2P47974 494 aaKnown RBP18.63■□□□□ 0.57
SMNDC1-201ENST00000369592 CCT3P49368 545 aaKnown RBP18.63■□□□□ 0.57
SMNDC1-201ENST00000369592 LHX2P50458 406 aa18.63■□□□□ 0.57
SMNDC1-201ENST00000369592 HBA1P69905 142 aa18.63■□□□□ 0.57
SMNDC1-201ENST00000369592 GRAMD1BQ3KR37 738 aa18.63■□□□□ 0.57
SMNDC1-201ENST00000369592 LSM12Q3MHD2 195 aaKnown RBP18.63■□□□□ 0.57
SMNDC1-201ENST00000369592 NSUN5P2Q63ZY6 315 aa18.63■□□□□ 0.57
SMNDC1-201ENST00000369592 TRIM42Q8IWZ5 723 aa18.63■□□□□ 0.57
SMNDC1-201ENST00000369592 OR4C3Q8NH37 302 aa18.63■□□□□ 0.57
SMNDC1-201ENST00000369592 ZPLD1Q8TCW7 415 aa18.63■□□□□ 0.57
SMNDC1-201ENST00000369592 SLC9A6Q92581 669 aa18.63■□□□□ 0.57
SMNDC1-201ENST00000369592 UCN2Q96RP3 112 aa18.63■□□□□ 0.57
SMNDC1-201ENST00000369592 TRIM8Q9BZR9 551 aa18.63■□□□□ 0.57
SMNDC1-201ENST00000369592 DSN1Q9H410 356 aa18.63■□□□□ 0.57
SMNDC1-201ENST00000369592 PIGUQ9H490 435 aa18.63■□□□□ 0.57
SMNDC1-201ENST00000369592 NEUROD4Q9HD90 331 aa18.63■□□□□ 0.57
SMNDC1-201ENST00000369592 ALKBH4Q9NXW9 302 aa18.63■□□□□ 0.57
SMNDC1-201ENST00000369592 ALG1L2C9J202 215 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms