RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 METTL4Q8N3J2 472 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 OR8J2Q8NGG1 315 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 TMEM239Q8WW34 195 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 ACOT11Q8WXI4 607 aaPredicted RBP12.95□□□□□ -0.34
VCP-201ENST00000358901 FKBP10Q96AY3 582 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 TCEAL4Q96EI5 215 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 TGM7Q96PF1 710 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 ZNF559Q9BR84 538 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 PINK1Q9BXM7 581 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 SYT4Q9H2B2 425 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 PDE7BQ9NP56 450 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 TMEM30AQ9NV96 361 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 ALS2Q96Q42 1657 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 WASH3PC4AMC7 463 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 H7C2Y5 167 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 M0R036 132 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 ADAMTS4O75173 837 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 KCNK5O95279 499 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 PLGP00747 810 aaPredicted RBP12.95□□□□□ -0.34
VCP-201ENST00000358901 PTH2RP49190 550 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 ZNF41P51814 821 aaPredicted RBP12.95□□□□□ -0.34
VCP-201ENST00000358901 DSC1Q08554 894 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 CDNFQ49AH0 187 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 MTFR2Q6P444 385 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 TRIM46Q7Z4K8 759 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 CDRT4Q8N9R6 151 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 UBE2FQ969M7 185 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 SLC39A1Q9NY26 324 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 TAS2R16Q9NYV7 291 aa12.95□□□□□ -0.34
VCP-201ENST00000358901 PTHP01270 115 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 CYP17A1P05093 508 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 GYPBP06028 91 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 NTSR1P30989 418 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 BMPR1AP36894 532 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 AIMP2Q13155 320 aaKnown RBP12.94□□□□□ -0.34
VCP-201ENST00000358901 GXYLT1Q4G148 440 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 WASH2PQ6VEQ5 465 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 RNF111Q6ZNA4 994 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 TMEM173Q86WV6 379 aaPredicted RBP12.94□□□□□ -0.34
VCP-201ENST00000358901 UBQLNLQ8IYU4 475 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.94□□□□□ -0.34
VCP-201ENST00000358901 PTGES2Q9H7Z7 377 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 CUEDC1Q9NWM3 386 aaPredicted RBP12.94□□□□□ -0.34
VCP-201ENST00000358901 PLCL2Q9UPR0 1127 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 AP1M2Q9Y6Q5 423 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 C1SP09871 688 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 CSNK1DP48730 415 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 DHPSP49366 369 aaPredicted RBP12.94□□□□□ -0.34
VCP-201ENST00000358901 KCNJ8Q15842 424 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 BEST3Q8N1M1 668 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 LINC01465Q8N7H1 131 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 OR4F15Q8NGB8 312 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 ZFYVE21Q9BQ24 234 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 ZNF334Q9HCZ1 680 aaPredicted RBP12.94□□□□□ -0.34
VCP-201ENST00000358901 TRAV18A0A075B6X5 111 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 GPR89AB7ZAQ6 455 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 GPR89BP0CG08 455 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 ITGB7P26010 798 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 IMPA1P29218 277 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 RBMXP38159 391 aaKnown RBP12.94□□□□□ -0.34
VCP-201ENST00000358901 PRLHRP49683 370 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 OCLNQ16625 522 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 COL28A1Q2UY09 1125 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 PIP5KL1Q5T9C9 394 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 SLC39A5Q6ZMH5 540 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 OR5W2Q8NH69 310 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 SYNPO2LQ9H987 977 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 POT1Q9NUX5 634 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 KLHL9Q9P2J3 617 aa12.94□□□□□ -0.34
VCP-201ENST00000358901 ARID1AO14497 2285 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 H0YIV9 168 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 ARHGAP33O14559 1287 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 CLEC3AO75596 197 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 GASTP01350 101 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 CAV3P56539 151 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 RNASE10Q5GAN6 216 aaKnown RBP12.93□□□□□ -0.34
VCP-201ENST00000358901 CCNJQ5T5M9 372 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 OTUD1Q5VV17 481 aaPredicted RBP12.93□□□□□ -0.34
VCP-201ENST00000358901 USP53Q70EK8 1073 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 ZNF767PQ75MW2 155 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 GALNT11Q8NCW6 608 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 KCNN1Q92952 543 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 TRMT2BQ96GJ1 504 aaKnown RBP12.93□□□□□ -0.34
VCP-201ENST00000358901 GPR174Q9BXC1 333 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 LOC102723532A0A0G2JNH3 316 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 TRBV4-1A0A0J9YWV2 114 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 CENPBD1B2RD01 187 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 HPGDSO60760 199 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 SFTPBP07988 381 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 CD3GP09693 182 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 JUNDP17535 347 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 DEFB103AP81534 67 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 SERPINA12Q8IW75 414 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 DAZLQ92904 295 aaKnown RBP12.93□□□□□ -0.34
VCP-201ENST00000358901 LMF1Q96S06 567 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 CENPOQ9BU64 300 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 COQ3Q9NZJ6 369 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 APOBEC3BQ9UH17 382 aaKnown RBP12.93□□□□□ -0.34
VCP-201ENST00000358901 IER3IP1Q9Y5U9 82 aa12.93□□□□□ -0.34
VCP-201ENST00000358901 MYH14Q7Z406 1995 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms