RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 RAB33AQ14088 237 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 GAL3ST3Q96A11 431 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 LINC00615Q96LM1 132 aaPredicted RBP3.81□□□□□ -1.8
USH2A-201ENST00000307340 SOX17Q9H6I2 414 aaPredicted RBP3.81□□□□□ -1.8
USH2A-201ENST00000307340 LYRM4Q9HD34 91 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 SLC17A7Q9P2U7 560 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 A0A1W2PQH9 124 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 SLC38A8A6NNN8 435 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 MRPS21P82921 87 aaKnown RBP3.81□□□□□ -1.8
USH2A-201ENST00000307340 TMEM115Q12893 351 aaPredicted RBP3.81□□□□□ -1.8
USH2A-201ENST00000307340 SCGB2A2Q13296 93 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 NAE1Q13564 534 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 LYSMD3Q7Z3D4 306 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 Q8IYB0 196 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 OLIG1Q8TAK6 271 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 OR2M4Q96R27 311 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 C1QTNF2Q9BXJ5 285 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 PLEKHA2Q9HB19 425 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 EMC7Q9NPA0 242 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 INSL5Q9Y5Q6 135 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 BHLHE40O14503 412 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 GJB3O75712 270 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 MAP2K3P46734 347 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 GJB7Q6PEY0 223 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 BEST3Q8N1M1 668 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 OR56B1Q8NGI3 324 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 NETO1Q8TDF5 533 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 TCTN2Q96GX1 697 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 FCRL4Q96PJ5 515 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 SMPD4Q9NXE4 827 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 ZNF175Q9Y473 711 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 A0A0G2JLW4 131 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 ISM1B1AKI9 464 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 TBX1O43435 398 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 DLX3O60479 287 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 MAGEA12P43365 314 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 CASP6P55212 293 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 ACVR1Q04771 509 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 EXOSC6Q5RKV6 272 aaKnown RBP3.81□□□□□ -1.8
USH2A-201ENST00000307340 CD276Q5ZPR3 534 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 DPY19L3Q6ZPD9 716 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 TREML1Q86YW5 311 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 C12orf29Q8N999 325 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 NEURL3Q96EH8 262 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 SIRT5Q9NXA8 310 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 CEPT1Q9Y6K0 416 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 ZNF35P13682 527 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 RRAS2P62070 204 aaPredicted RBP3.81□□□□□ -1.8
USH2A-201ENST00000307340 GBE1Q04446 702 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 AMHR2Q16671 573 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 KLBQ86Z14 1044 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 PCYT2Q99447 389 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 KCNJ15Q99712 375 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 PTPRDP23468 1912 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 SCN10AQ9Y5Y9 1956 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 A0A087WV62 115 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 BRINP1O60477 761 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 CLEC3BP05452 202 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 IRF1P10914 325 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 PRKACBP22694 351 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 ADCYAP1R1P41586 468 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 SNTB1Q13884 538 aaKnown RBP3.81□□□□□ -1.8
USH2A-201ENST00000307340 NMUR1Q9HB89 426 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 PCDH12Q9NPG4 1184 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 UBQLN4Q9NRR5 601 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 TBC1D24Q9ULP9 559 aa3.81□□□□□ -1.8
USH2A-201ENST00000307340 DFFBO76075 338 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 DPEP1P16444 411 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 OR10H4Q8NGA5 316 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.8□□□□□ -1.8
USH2A-201ENST00000307340 SLC39A7Q92504 469 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 AIG1Q9NVV5 245 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 IKZF2Q9UKS7 526 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 GPR25O00155 361 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 RBMXL2O75526 392 aaKnown RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 C1GALT1C1LP0DN25 315 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 EMP3P54852 163 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 PCDH1Q08174 1060 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 DYRK1AQ13627 763 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 EGFLAMQ63HQ2 1017 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 ERN2Q76MJ5 926 aaKnown RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 OR4E2Q8NGC2 313 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 OR5T3Q8NGG3 340 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 TFGQ92734 400 aaPredicted RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 SLC6A18Q96N87 628 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 GABARAPL1Q9H0R8 117 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 ADAM7Q9H2U9 754 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 CPVLQ9H3G5 476 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 GHITMQ9H3K2 345 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 DDX4Q9NQI0 724 aaKnown RBP3.8□□□□□ -1.8
USH2A-201ENST00000307340 DUSP22Q9NRW4 184 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 NPEPPSL1A6NEC2 478 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 GGT3PA6NGU5 568 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 OR1F1O43749 312 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 GABBR2O75899 941 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 SERPINA5P05154 406 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 GGT2P36268 569 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 SPINT3P49223 89 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 RGS6P49758 472 aa3.8□□□□□ -1.8
USH2A-201ENST00000307340 GPR85P60893 370 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms