RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 MT-ND1P03886 318 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 FESP07332 822 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 THBS1P07996 1170 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 PABPC4LP0CB38 370 aaKnown RBP9.55□□□□□ -0.88
USP3-219ENST00000561326 CT45A8P0DMV1 189 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 CT45A9P0DMV2 189 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 LCN1P31025 176 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 PIGAP37287 484 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 MAGEA2P43356 314 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 CRYBA2P53672 197 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 FUT5Q11128 374 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 SSPNQ14714 243 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 DUSP7Q16829 419 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 LRRC36Q1X8D7 754 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 GRAMD1BQ3KR37 738 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 FLYWCH1Q4VC44 716 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 EIPR1Q53HC9 387 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 CT45A2Q5DJT8 189 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 OGFRL1Q5TC84 451 aaPredicted RBP9.55□□□□□ -0.88
USP3-219ENST00000561326 OR2T5Q6IEZ7 315 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 TYW3Q6IPR3 259 aaKnown RBP9.55□□□□□ -0.88
USP3-219ENST00000561326 PAPD4Q6PIY7 484 aaKnown RBP9.55□□□□□ -0.88
USP3-219ENST00000561326 HSDL2Q6YN16 418 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 ZBTB49Q6ZSB9 765 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 CYP4Z1Q86W10 505 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 SVOPLQ8N434 492 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 SMYD1Q8NB12 490 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 ICA1LQ8NDH6 482 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 C17orf47Q8NEP4 570 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 OR2T29Q8NH02 315 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 OR8K3Q8NH51 312 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 OR52P1PQ8NH57 321 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 OIT3Q8WWZ8 545 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 ADAMTS14Q8WXS8 1223 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 TP53INP1Q96A56 240 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 SDCCAG3Q96C92 435 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 HSPBAP1Q96EW2 488 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 RMND5BQ96G75 393 aaPredicted RBP9.55□□□□□ -0.88
USP3-219ENST00000561326 PHOX2BQ99453 314 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 ITPAQ9BY32 194 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 ZNF350Q9GZX5 532 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 HOXD1Q9GZZ0 328 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 THSD1Q9NS62 852 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 PPIEQ9UNP9 301 aaKnown RBP9.55□□□□□ -0.88
USP3-219ENST00000561326 DSPPQ9NZW4 1301 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 HEATR5AQ86XA9 2040 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 EXPH5Q8NEV8 1989 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 LOC102723996A0A087X1L8 192 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 IGHV3-20A0A0C4DH32 117 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 FAM149AA5PLN7 773 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 AGAP5A6NIR3 686 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 hCG_2039718K7EN88 272 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 SYT5O00445 386 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 ADAMDEC1O15204 470 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 ACOX3O15254 700 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 HS6ST1O60243 411 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 ZFAND5O76080 213 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 LGI1O95970 557 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 CLPSP04118 112 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 SEMG1P04279 462 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 ICAM2P13598 275 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 RHCEP18577 417 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 CD247P20963 164 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 MMP11P24347 488 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 PRKAR1BP31321 381 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 IFNA8P32881 189 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 RFX3P48380 749 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 EFNA3P52797 238 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 NRG3P56975 720 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 SMIM11AP58511 58 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 RNF4P78317 190 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 GABREP78334 506 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 VLDLRP98155 873 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 EXT1Q16394 746 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.54□□□□□ -0.88
USP3-219ENST00000561326 CCNJQ5T5M9 372 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 LPCAT4Q643R3 524 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 HMBOX1Q6NT76 420 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 FIGNL1Q6PIW4 674 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 DHRS4L2Q6PKH6 230 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 FRRS1Q6ZNA5 592 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 TIPARPQ7Z3E1 657 aaKnown RBP9.54□□□□□ -0.88
USP3-219ENST00000561326 PACS2Q86VP3 889 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 ZDHHC13Q8IUH4 622 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 BCORP1Q8N888 145 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 NFAM1Q8NET5 270 aaPredicted RBP9.54□□□□□ -0.88
USP3-219ENST00000561326 FAM110BQ8TC76 370 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 CT55Q8WUE5 264 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 NRG4Q8WWG1 115 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 NR4A3Q92570 626 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 ADIPOR1Q96A54 375 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 C7orf34Q96L11 122 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 GAL3ST4Q96RP7 486 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 TACO1Q9BSH4 297 aaKnown RBP9.54□□□□□ -0.88
USP3-219ENST00000561326 SEMA4CQ9C0C4 833 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 WWTR1Q9GZV5 400 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 ZNF700Q9H0M5 742 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 REEP1Q9H902 201 aa9.54□□□□□ -0.88
USP3-219ENST00000561326 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.54□□□□□ -0.88
USP3-219ENST00000561326 RYDENQ9NUL5 291 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms