RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 CLHC1Q8NHS4 586 aa9.42□□□□□ -0.9
SHMT2-224ENST00000556737 RND1Q92730 232 aa9.42□□□□□ -0.9
SHMT2-224ENST00000556737 HOXB13Q92826 284 aaPredicted RBP9.42□□□□□ -0.9
SHMT2-224ENST00000556737 GFM2Q969S9 779 aaKnown RBP9.42□□□□□ -0.9
SHMT2-224ENST00000556737 CIDECQ96AQ7 238 aaPredicted RBP9.42□□□□□ -0.9
SHMT2-224ENST00000556737 PPP1R36Q96LQ0 422 aa9.42□□□□□ -0.9
SHMT2-224ENST00000556737 C3orf30Q96M34 536 aa9.42□□□□□ -0.9
SHMT2-224ENST00000556737 TSSK3Q96PN8 268 aa9.42□□□□□ -0.9
SHMT2-224ENST00000556737 LMF2Q9BU23 707 aaKnown RBP9.42□□□□□ -0.9
SHMT2-224ENST00000556737 C20orf27Q9GZN8 174 aa9.42□□□□□ -0.9
SHMT2-224ENST00000556737 PRDM14Q9GZV8 571 aa9.42□□□□□ -0.9
SHMT2-224ENST00000556737 ENKD1Q9H0I2 346 aa9.42□□□□□ -0.9
SHMT2-224ENST00000556737 EXO5Q9H790 373 aa9.42□□□□□ -0.9
SHMT2-224ENST00000556737 NPDC1Q9NQX5 325 aaPredicted RBP9.42□□□□□ -0.9
SHMT2-224ENST00000556737 PNPOQ9NVS9 261 aa9.42□□□□□ -0.9
SHMT2-224ENST00000556737 TAS2R9Q9NYW1 312 aa9.42□□□□□ -0.9
SHMT2-224ENST00000556737 COQ3Q9NZJ6 369 aa9.42□□□□□ -0.9
SHMT2-224ENST00000556737 Q9UFV3 132 aa9.42□□□□□ -0.9
SHMT2-224ENST00000556737 ZDHHC2Q9UIJ5 367 aa9.42□□□□□ -0.9
SHMT2-224ENST00000556737 MAPRE3Q9UPY8 281 aa9.42□□□□□ -0.9
SHMT2-224ENST00000556737 TMED5Q9Y3A6 229 aa9.42□□□□□ -0.9
SHMT2-224ENST00000556737 RAP2CQ9Y3L5 183 aa9.42□□□□□ -0.9
SHMT2-224ENST00000556737 TRAF6Q9Y4K3 522 aa9.42□□□□□ -0.9
SHMT2-224ENST00000556737 PCDHGB3Q9Y5G1 929 aa9.42□□□□□ -0.9
SHMT2-224ENST00000556737 WIF1Q9Y5W5 379 aa9.42□□□□□ -0.9
SHMT2-224ENST00000556737 PDZD2O15018 2839 aa9.42□□□□□ -0.9
SHMT2-224ENST00000556737 CACNA1DQ01668 2161 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 C15orf38-AP3S2A0A0A6YYH1 394 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 NKX2-6A6NCS4 301 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 C2orf72A6NCS6 295 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 FAM90A27PA6NNH2 459 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 AKAP10O43572 662 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 ABCB7O75027 752 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 SKAP2O75563 359 aaPredicted RBP9.41□□□□□ -0.9
SHMT2-224ENST00000556737 TOXO94900 526 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 SNUPNO95149 360 aaKnown RBP9.41□□□□□ -0.9
SHMT2-224ENST00000556737 CHEK2O96017 543 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 SNRPB2P08579 225 aaKnown RBP9.41□□□□□ -0.9
SHMT2-224ENST00000556737 BCKDHAP12694 445 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 CYP4B1P13584 511 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 MAP3K8P41279 467 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 HSPB3Q12988 150 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 GALNTL6Q49A17 601 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 ACSF3Q4G176 576 aaPredicted RBP9.41□□□□□ -0.9
SHMT2-224ENST00000556737 WIPI1Q5MNZ9 446 aaPredicted RBP9.41□□□□□ -0.9
SHMT2-224ENST00000556737 ACAD11Q709F0 780 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 ZNF551Q7Z340 670 aaPredicted RBP9.41□□□□□ -0.9
SHMT2-224ENST00000556737 WDR53Q7Z5U6 358 aaPredicted RBP9.41□□□□□ -0.9
SHMT2-224ENST00000556737 SLC44A2Q8IWA5 706 aaPredicted RBP9.41□□□□□ -0.9
SHMT2-224ENST00000556737 KIRREL3Q8IZU9 778 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 ZNF295-AS1Q8N0V1 137 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 CLYBLQ8N0X4 340 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 LIX1Q8N485 282 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 ANKS4BQ8N8V4 417 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 CCDC197Q8NCU1 140 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 FAM83FQ8NEG4 500 aaPredicted RBP9.41□□□□□ -0.9
SHMT2-224ENST00000556737 OR1J4Q8NGS1 313 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 LILRB4Q8NHJ6 448 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 PIWIL2Q8TC59 973 aaKnown RBP9.41□□□□□ -0.9
SHMT2-224ENST00000556737 CA5BP1Q8WTZ4 195 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 ASB5Q8WWX0 329 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 EFHD2Q96C19 240 aaPredicted RBP9.41□□□□□ -0.9
SHMT2-224ENST00000556737 ELP4Q96EB1 424 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 ADOQ96SZ5 270 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 SORT1Q99523 831 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 TIMP4Q99727 224 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 UGT2B28Q9BY64 529 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 UCK2Q9BZX2 261 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 OR2B2Q9GZK3 357 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 REEP4Q9H6H4 257 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 SERHLQ9NQF3 203 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 DDX18Q9NVP1 670 aaKnown RBP9.41□□□□□ -0.9
SHMT2-224ENST00000556737 KLRF1Q9NZS2 232 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 FLRT3Q9NZU0 649 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 BAIAP2L1Q9UHR4 511 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 ACAD8Q9UKU7 415 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 SLC6A5Q9Y345 797 aa9.41□□□□□ -0.9
SHMT2-224ENST00000556737 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 DIAPH2O60879 1101 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 REM1O75628 298 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 TRAPPC6AO75865 159 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 GABRA1P14867 456 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 BMP7P18075 431 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 MSX1P28360 303 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 IL12BP29460 328 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 ARFIP2P53365 341 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 PNLIPRP2P54317 469 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 AQP5P55064 265 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 WNT3P56703 355 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 EFR3AQ14156 821 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 RIPPLY2Q5TAB7 128 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 VASNQ6EMK4 673 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 CGB2Q6NT52 195 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 LARP4Q71RC2 724 aaKnown RBP eCLIP9.4□□□□□ -0.9
SHMT2-224ENST00000556737 YRDCQ86U90 279 aaKnown RBP9.4□□□□□ -0.9
SHMT2-224ENST00000556737 LIX1LQ8IVB5 337 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 NAXEQ8NCW5 288 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 RFWD2Q8NHY2 731 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 PPCDCQ96CD2 204 aa9.4□□□□□ -0.9
SHMT2-224ENST00000556737 TMCO6Q96DC7 493 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms