RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 ACOX3O15254 700 aa11.43□□□□□ -0.58
DDB1-209ENST00000537877 SEC24DO94855 1032 aaPredicted RBP11.43□□□□□ -0.58
DDB1-209ENST00000537877 ZIC2O95409 532 aaPredicted RBP11.43□□□□□ -0.58
DDB1-209ENST00000537877 LDLRP01130 860 aa11.43□□□□□ -0.58
DDB1-209ENST00000537877 FABP3P05413 133 aa11.43□□□□□ -0.58
DDB1-209ENST00000537877 THBS1P07996 1170 aa11.43□□□□□ -0.58
DDB1-209ENST00000537877 PABPC4LP0CB38 370 aaKnown RBP11.43□□□□□ -0.58
DDB1-209ENST00000537877 ATP6V1C1P21283 382 aa11.43□□□□□ -0.58
DDB1-209ENST00000537877 RPS4Y1P22090 263 aaKnown RBP11.43□□□□□ -0.58
DDB1-209ENST00000537877 PSMD4P55036 377 aaKnown RBP11.43□□□□□ -0.58
DDB1-209ENST00000537877 SLC26A5P58743 744 aa11.43□□□□□ -0.58
DDB1-209ENST00000537877 KCNC4Q03721 635 aa11.43□□□□□ -0.58
DDB1-209ENST00000537877 PCOLCEQ15113 449 aa11.43□□□□□ -0.58
DDB1-209ENST00000537877 ATP6AP1Q15904 470 aa11.43□□□□□ -0.58
DDB1-209ENST00000537877 EXT1Q16394 746 aa11.43□□□□□ -0.58
DDB1-209ENST00000537877 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.43□□□□□ -0.58
DDB1-209ENST00000537877 CCNJQ5T5M9 372 aa11.43□□□□□ -0.58
DDB1-209ENST00000537877 DHRS4L2Q6PKH6 230 aa11.43□□□□□ -0.58
DDB1-209ENST00000537877 PIWIL3Q7Z3Z3 882 aaKnown RBP11.43□□□□□ -0.58
DDB1-209ENST00000537877 SMYD1Q8NB12 490 aa11.43□□□□□ -0.58
DDB1-209ENST00000537877 APCDD1LQ8NCL9 501 aa11.43□□□□□ -0.58
DDB1-209ENST00000537877 OR8K3Q8NH51 312 aa11.43□□□□□ -0.58
DDB1-209ENST00000537877 FAM110BQ8TC76 370 aa11.43□□□□□ -0.58
DDB1-209ENST00000537877 CENPNQ96H22 339 aaPredicted RBP11.43□□□□□ -0.58
DDB1-209ENST00000537877 VPS50Q96JG6 964 aa11.43□□□□□ -0.58
DDB1-209ENST00000537877 ZNF354BQ96LW1 612 aa11.43□□□□□ -0.58
DDB1-209ENST00000537877 WWTR1Q9GZV5 400 aa11.43□□□□□ -0.58
DDB1-209ENST00000537877 VCX3BQ9H321 246 aa11.43□□□□□ -0.58
DDB1-209ENST00000537877 THSD1Q9NS62 852 aa11.43□□□□□ -0.58
DDB1-209ENST00000537877 DLL3Q9NYJ7 618 aa11.43□□□□□ -0.58
DDB1-209ENST00000537877 MRTO4Q9UKD2 239 aaKnown RBP11.43□□□□□ -0.58
DDB1-209ENST00000537877 MKLN1Q9UL63 735 aa11.43□□□□□ -0.58
DDB1-209ENST00000537877 PCDHGA10Q9Y5H3 936 aa11.43□□□□□ -0.58
DDB1-209ENST00000537877 HS3ST3B1Q9Y662 390 aa11.43□□□□□ -0.58
DDB1-209ENST00000537877 WDR87Q6ZQQ6 2873 aa11.43□□□□□ -0.58
DDB1-209ENST00000537877 CCDC88CQ9P219 2028 aa11.43□□□□□ -0.58
DDB1-209ENST00000537877 IGHV1-45A0A0A0MS14 117 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 AGAP5A6NIR3 686 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 TERTO14746 1132 aaKnown RBP11.42□□□□□ -0.58
DDB1-209ENST00000537877 TO15178 435 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 FCMRO60667 390 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 DXOO77932 396 aaKnown RBP11.42□□□□□ -0.58
DDB1-209ENST00000537877 MT-ND1P03886 318 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 DBIP07108 87 aaKnown RBP11.42□□□□□ -0.58
DDB1-209ENST00000537877 FESP07332 822 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 ITGA2P17301 1181 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 LCN1P31025 176 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 PRKAR1BP31321 381 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 PTDSS1P48651 473 aaKnown RBP11.42□□□□□ -0.58
DDB1-209ENST00000537877 VLDLRP98155 873 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 SSPNQ14714 243 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 LARS2Q15031 903 aaKnown RBP11.42□□□□□ -0.58
DDB1-209ENST00000537877 TRIP10Q15642 601 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 DECR1Q16698 335 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 DUSP7Q16829 419 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 FLYWCH1Q4VC44 716 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 LIN52Q52LA3 116 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 EIPR1Q53HC9 387 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 HMBOX1Q6NT76 420 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 FIGNL1Q6PIW4 674 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 HSDL2Q6YN16 418 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 OLIG3Q7RTU3 272 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 ZNF441Q8N8Z8 693 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 ZSCAN1Q8NBB4 408 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 CATSPER1Q8NEC5 780 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 GPR32P1Q8NGA4 272 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 OR10Q1Q8NGQ4 319 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 OR52P1PQ8NH57 321 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 NUBPLQ8TB37 319 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 APOBEC4Q8WW27 367 aaKnown RBP11.42□□□□□ -0.58
DDB1-209ENST00000537877 TP53INP1Q96A56 240 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 C8orf44Q96CB5 159 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 HSPBAP1Q96EW2 488 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 C7orf34Q96L11 122 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 GAL3ST4Q96RP7 486 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 BDH2Q9BUT1 245 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 NRSN2Q9GZP1 204 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 NXF5Q9H1B4 397 aaKnown RBP11.42□□□□□ -0.58
DDB1-209ENST00000537877 EVA1AQ9H8M9 152 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 DNAJB9Q9UBS3 223 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 ZNF223Q9UK11 482 aaPredicted RBP11.42□□□□□ -0.58
DDB1-209ENST00000537877 SLC9A8Q9Y2E8 581 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 PCDHGA6Q9Y5G7 932 aa11.42□□□□□ -0.58
DDB1-209ENST00000537877 TRBV11-1A0A0K0K1C0 115 aa11.41□□□□□ -0.58
DDB1-209ENST00000537877 SOCS6O14544 535 aa11.41□□□□□ -0.58
DDB1-209ENST00000537877 CLOCKO15516 846 aa11.41□□□□□ -0.58
DDB1-209ENST00000537877 DPM1O60762 260 aa11.41□□□□□ -0.58
DDB1-209ENST00000537877 PRSS23O95084 383 aa11.41□□□□□ -0.58
DDB1-209ENST00000537877 IL33O95760 270 aa11.41□□□□□ -0.58
DDB1-209ENST00000537877 CST1P01037 141 aa11.41□□□□□ -0.58
DDB1-209ENST00000537877 CAPNS1P04632 268 aa11.41□□□□□ -0.58
DDB1-209ENST00000537877 IFNW1P05000 195 aa11.41□□□□□ -0.58
DDB1-209ENST00000537877 COX6A1P12074 109 aa11.41□□□□□ -0.58
DDB1-209ENST00000537877 NID1P14543 1247 aa11.41□□□□□ -0.58
DDB1-209ENST00000537877 DLSTP36957 453 aa11.41□□□□□ -0.58
DDB1-209ENST00000537877 VHLP40337 213 aa11.41□□□□□ -0.58
DDB1-209ENST00000537877 RNF4P78317 190 aa11.41□□□□□ -0.58
DDB1-209ENST00000537877 GPR68Q15743 365 aa11.41□□□□□ -0.58
DDB1-209ENST00000537877 NNATQ16517 81 aa11.41□□□□□ -0.58
DDB1-209ENST00000537877 RSPO4Q2I0M5 234 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms