RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 NARFLQ9H6Q4 476 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 MYNNQ9NPC7 610 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 MS4A12Q9NXJ0 267 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 PPP4R1LQ9P1A2 415 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 STOML1Q9UBI4 398 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 ZNF490Q9ULM2 529 aaPredicted RBP6.34□□□□□ -1.39
VCAN-207ENST00000507162 AP4B1Q9Y6B7 739 aa6.34□□□□□ -1.39
VCAN-207ENST00000507162 NOTCH3Q9UM47 2321 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 A0A1W2PR80 420 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 A0A1W2PS29 197 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 B4DXG7 233 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 ZNF814B7Z6K7 855 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 SCO2O43819 266 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 GMFGO60234 142 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 TGFB1P01137 390 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 AVPP01185 164 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 DAOP14920 347 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 IFNGR1P15260 489 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 DDX5P17844 614 aaKnown RBP6.33□□□□□ -1.4
VCAN-207ENST00000507162 GGT1P19440 569 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 NT5EP21589 574 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 MDKP21741 143 aaPredicted RBP6.33□□□□□ -1.4
VCAN-207ENST00000507162 FPR2P25090 351 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 GSTM2P28161 218 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 IL2P60568 153 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 SNRPD2P62316 118 aaKnown RBP6.33□□□□□ -1.4
VCAN-207ENST00000507162 DUSP2Q05923 314 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 STX5Q13190 355 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 STX1AQ16623 288 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 ASTE1Q2TB18 679 aaPredicted RBP6.33□□□□□ -1.4
VCAN-207ENST00000507162 MST1LQ2TV78 715 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 C18orf21Q32NC0 220 aaPredicted RBP6.33□□□□□ -1.4
VCAN-207ENST00000507162 TIMM23BQ5SRD1 257 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 OR4C11Q6IEV9 310 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 C1orf229Q6ZS94 237 aaPredicted RBP6.33□□□□□ -1.4
VCAN-207ENST00000507162 GALNT10Q86SR1 603 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 TEX29Q8N6K0 151 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 C17orf47Q8NEP4 570 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 TOR1AIP2Q8NFQ8 470 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 TRIM58Q8NG06 486 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 OR2M3Q8NG83 312 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 REXO5Q96IC2 774 aaKnown RBP6.33□□□□□ -1.4
VCAN-207ENST00000507162 EGFL8Q99944 293 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 ITPAQ9BY32 194 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 SAP130Q9H0E3 1048 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 TSPY26PQ9H489 355 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 NT5DC2Q9H857 520 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 NTN4Q9HB63 628 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 ASIC3Q9UHC3 531 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 SOX13Q9UN79 622 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 PCNX3Q9H6A9 2034 aa6.33□□□□□ -1.4
VCAN-207ENST00000507162 TNFSF11O14788 317 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 ACOX3O15254 700 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 EEDO75530 441 aaKnown RBP6.32□□□□□ -1.4
VCAN-207ENST00000507162 IL33O95760 270 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 MSMBP08118 114 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 ZSCAN5DPP0CG00 497 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 PCNAP12004 261 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 ADRA2CP18825 462 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 PGCP20142 388 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 OMGP23515 440 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 PRTN3P24158 256 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 GIFP27352 417 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 PIK3R1P27986 724 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 STIP1P31948 543 aaKnown RBP6.32□□□□□ -1.4
VCAN-207ENST00000507162 GALNSP34059 522 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 PCGF2P35227 344 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 PTPN7P35236 360 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 KRT20P35900 424 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 PGGT1BP53609 377 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 TERF1P54274 439 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 HNRNPH2P55795 449 aaKnown RBP6.32□□□□□ -1.4
VCAN-207ENST00000507162 RWDD2BP57060 319 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 TIAL1Q01085 375 aaKnown RBP eCLIP6.32□□□□□ -1.4
VCAN-207ENST00000507162 TNFRSF17Q02223 184 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 DHX34Q14147 1143 aaKnown RBP6.32□□□□□ -1.4
VCAN-207ENST00000507162 EXOSC7Q15024 291 aaKnown RBP6.32□□□□□ -1.4
VCAN-207ENST00000507162 HIST2H2ACQ16777 129 aaPredicted RBP6.32□□□□□ -1.4
VCAN-207ENST00000507162 SWI5Q1ZZU3 235 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 TSNAXIP1Q2TAA8 658 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 HIST2H2AA3Q6FI13 130 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 LEG1Q6P5S2 330 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 FAM111BQ6SJ93 734 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 C17orf107Q6ZR85 190 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 GGNQ86UU5 652 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 SIGLECL1Q8N7X8 197 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 GBP7Q8N8V2 638 aaPredicted RBP6.32□□□□□ -1.4
VCAN-207ENST00000507162 OR7G1Q8NGA0 311 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 FAM110DQ8TAY7 271 aaPredicted RBP6.32□□□□□ -1.4
VCAN-207ENST00000507162 FAM110BQ8TC76 370 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 MRAPQ8TCY5 172 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 ATG4AQ8WYN0 398 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 OSTF1Q92882 214 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 CCDC42Q96M95 316 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 BRINP2Q9C0B6 783 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 RAB1BQ9H0U4 201 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 OR51B5Q9H339 312 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 EHD1Q9H4M9 534 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 PTGES2Q9H7Z7 377 aa6.32□□□□□ -1.4
VCAN-207ENST00000507162 FKRPQ9H9S5 495 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms