RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 GAB1Q13480 694 aa10.7□□□□□ -0.7
SRSF4-204ENST00000489898 LARP4Q71RC2 724 aaKnown RBP eCLIP10.7□□□□□ -0.7
SRSF4-204ENST00000489898 SLC44A2Q8IWA5 706 aaPredicted RBP10.7□□□□□ -0.7
SRSF4-204ENST00000489898 CLHC1Q8NHS4 586 aa10.7□□□□□ -0.7
SRSF4-204ENST00000489898 ZPLD1Q8TCW7 415 aa10.7□□□□□ -0.7
SRSF4-204ENST00000489898 CAVIN3Q969G5 261 aa10.7□□□□□ -0.7
SRSF4-204ENST00000489898 ABTB1Q969K4 478 aaPredicted RBP10.7□□□□□ -0.7
SRSF4-204ENST00000489898 FAM111AQ96PZ2 611 aa10.7□□□□□ -0.7
SRSF4-204ENST00000489898 STMN4Q9H169 189 aaPredicted RBP10.7□□□□□ -0.7
SRSF4-204ENST00000489898 LRTM1Q9HBL6 345 aa10.7□□□□□ -0.7
SRSF4-204ENST00000489898 PRM3Q9NNZ6 103 aa10.7□□□□□ -0.7
SRSF4-204ENST00000489898 FBXO34Q9NWN3 711 aa10.7□□□□□ -0.7
SRSF4-204ENST00000489898 C1orf109Q9NX04 203 aa10.7□□□□□ -0.7
SRSF4-204ENST00000489898 KLRF1Q9NZS2 232 aa10.7□□□□□ -0.7
SRSF4-204ENST00000489898 PSME2Q9UL46 239 aa10.7□□□□□ -0.7
SRSF4-204ENST00000489898 GRID1Q9ULK0 1009 aa10.7□□□□□ -0.7
SRSF4-204ENST00000489898 MRPS18CQ9Y3D5 142 aaKnown RBP10.7□□□□□ -0.7
SRSF4-204ENST00000489898 CLCA1A8K7I4 914 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 SYT5O00445 386 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 PIP5K1BO14986 540 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 NPHS1O60500 1241 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 BCAS2O75934 225 aaPredicted RBP10.69□□□□□ -0.7
SRSF4-204ENST00000489898 NKX2-2O95096 273 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 IL33O95760 270 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 FGF4P08620 206 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 BCKDHAP12694 445 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 KRT15P19012 456 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 BMP5P22003 454 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 PSMA4P25789 261 aaKnown RBP10.69□□□□□ -0.7
SRSF4-204ENST00000489898 STARP49675 285 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 PTGR1Q14914 329 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 ARL13AQ5H913 290 aaPredicted RBP10.69□□□□□ -0.7
SRSF4-204ENST00000489898 C6orf163Q5TEZ5 329 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 OR5M10Q6IEU7 315 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 WDR93Q6P2C0 686 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 GGNQ86UU5 652 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 LSRQ86X29 649 aaPredicted RBP10.69□□□□□ -0.7
SRSF4-204ENST00000489898 KRTAP1-3Q8IUG1 177 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 TRIM42Q8IWZ5 723 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 SAMD14Q8IZD0 417 aaPredicted RBP10.69□□□□□ -0.7
SRSF4-204ENST00000489898 RIBC1Q8N443 379 aaPredicted RBP10.69□□□□□ -0.7
SRSF4-204ENST00000489898 LIX1Q8N485 282 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 MREGQ8N565 214 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 CDC26Q8NHZ8 85 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 PSMA8Q8TAA3 256 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 FAM110BQ8TC76 370 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 TCP10LQ8TDR4 215 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 TWIST2Q8WVJ9 160 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 GFM2Q969S9 779 aaKnown RBP10.69□□□□□ -0.7
SRSF4-204ENST00000489898 TSSK3Q96PN8 268 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 TRMOQ9BU70 441 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 TMEM109Q9BVC6 243 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 C20orf27Q9GZN8 174 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 CXXC4Q9H2H0 198 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 SERHL2Q9H4I8 314 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 EXO5Q9H790 373 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 FAM120CQ9NX05 1096 aaKnown RBP10.69□□□□□ -0.7
SRSF4-204ENST00000489898 ZNF629Q9UEG4 869 aaPredicted RBP10.69□□□□□ -0.7
SRSF4-204ENST00000489898 ABCG2Q9UNQ0 655 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 CAMK2AQ9UQM7 478 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 NAV3Q8IVL0 2385 aa10.69□□□□□ -0.7
SRSF4-204ENST00000489898 HSPB2A8KAH6 182 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 PDPK1O15530 556 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 SCO2O43819 266 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 TRIM13O60858 407 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 COQ9O75208 318 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 SPAG7O75391 227 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 REM1O75628 298 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 CBR3O75828 277 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 TRAPPC6AO75865 159 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 LINC00032P0C843 101 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 DHRS4L1P0CG22 281 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 CAPN3P20807 821 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 EFNA1P20827 205 aaPredicted RBP10.68□□□□□ -0.7
SRSF4-204ENST00000489898 DNAJA1P31689 397 aaKnown RBP10.68□□□□□ -0.7
SRSF4-204ENST00000489898 AGFG1P52594 562 aaKnown RBP10.68□□□□□ -0.7
SRSF4-204ENST00000489898 SUCLG1P53597 346 aaKnown RBP10.68□□□□□ -0.7
SRSF4-204ENST00000489898 PLAURQ03405 335 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 ZNF844Q08AG5 666 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 EFR3AQ14156 821 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 MPP2Q14168 576 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 HSPB2Q16082 182 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 ERCC6LQ2NKX8 1250 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 CTU2Q2VPK5 515 aaKnown RBP10.68□□□□□ -0.7
SRSF4-204ENST00000489898 GRAMD1BQ3KR37 738 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 SPDYAQ5MJ70 313 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 MFSD12Q6NUT3 480 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 ARSKQ6UWY0 536 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 IFNEQ86WN2 208 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 RIMKLAQ8IXN7 391 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 ZZZ3Q8IYH5 903 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 PM20D2Q8IYS1 436 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 CNPY4Q8N129 248 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 OR10Q1Q8NGQ4 319 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 PIK3R3Q92569 461 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 RNASE6Q93091 150 aaKnown RBP10.68□□□□□ -0.7
SRSF4-204ENST00000489898 ADGRG7Q96K78 797 aa10.68□□□□□ -0.7
SRSF4-204ENST00000489898 GPATCH1Q9BRR8 931 aaKnown RBP10.68□□□□□ -0.7
SRSF4-204ENST00000489898 ZNF395Q9H8N7 513 aaPredicted RBP10.68□□□□□ -0.7
SRSF4-204ENST00000489898 CALHM2Q9HA72 323 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms