RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 ZNF551Q7Z340 670 aaPredicted RBP14.4□□□□□ -0.1
GARNL3-215ENST00000478702 R3HCC1LQ7Z5L2 792 aaKnown RBP14.4□□□□□ -0.1
GARNL3-215ENST00000478702 KIRREL3Q8IZU9 778 aa14.4□□□□□ -0.1
GARNL3-215ENST00000478702 ANKRD42Q8N9B4 389 aa14.4□□□□□ -0.1
GARNL3-215ENST00000478702 FNDC5Q8NAU1 212 aa14.4□□□□□ -0.1
GARNL3-215ENST00000478702 NINJ1Q92982 152 aa14.4□□□□□ -0.1
GARNL3-215ENST00000478702 TLCD1Q96CP7 247 aa14.4□□□□□ -0.1
GARNL3-215ENST00000478702 ZBED6CLQ96FA7 236 aaPredicted RBP14.4□□□□□ -0.1
GARNL3-215ENST00000478702 COL21A1Q96P44 957 aa14.4□□□□□ -0.1
GARNL3-215ENST00000478702 UBQLN3Q9H347 655 aa14.4□□□□□ -0.1
GARNL3-215ENST00000478702 DNAJB12Q9NXW2 375 aaKnown RBP14.4□□□□□ -0.1
GARNL3-215ENST00000478702 Q9UFV3 132 aa14.4□□□□□ -0.1
GARNL3-215ENST00000478702 ATP6V1HQ9UI12 483 aa14.4□□□□□ -0.1
GARNL3-215ENST00000478702 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.4□□□□□ -0.1
GARNL3-215ENST00000478702 C15orf41Q9Y2V0 281 aa14.4□□□□□ -0.1
GARNL3-215ENST00000478702 NUP214P35658 2090 aaPredicted RBP14.4□□□□□ -0.1
GARNL3-215ENST00000478702 TRGV5A0A0B4J1U4 118 aa14.39□□□□□ -0.11
GARNL3-215ENST00000478702 BCKDKO14874 412 aa14.39□□□□□ -0.11
GARNL3-215ENST00000478702 PRPS2P11908 318 aa14.39□□□□□ -0.11
GARNL3-215ENST00000478702 DDX5P17844 614 aaKnown RBP14.39□□□□□ -0.11
GARNL3-215ENST00000478702 RPL3P39023 403 aaKnown RBP14.39□□□□□ -0.11
GARNL3-215ENST00000478702 PTGDSP41222 190 aa14.39□□□□□ -0.11
GARNL3-215ENST00000478702 ZFP36L2P47974 494 aaKnown RBP14.39□□□□□ -0.11
GARNL3-215ENST00000478702 MAN2A2P49641 1150 aa14.39□□□□□ -0.11
GARNL3-215ENST00000478702 SLC18A1P54219 525 aa14.39□□□□□ -0.11
GARNL3-215ENST00000478702 WDR4P57081 412 aaKnown RBP14.39□□□□□ -0.11
GARNL3-215ENST00000478702 SNTA1Q13424 505 aa14.39□□□□□ -0.11
GARNL3-215ENST00000478702 SNTB1Q13884 538 aaKnown RBP14.39□□□□□ -0.11
GARNL3-215ENST00000478702 EFR3AQ14156 821 aa14.39□□□□□ -0.11
GARNL3-215ENST00000478702 CASP8Q14790 479 aa14.39□□□□□ -0.11
GARNL3-215ENST00000478702 SLC10A1Q14973 349 aa14.39□□□□□ -0.11
GARNL3-215ENST00000478702 SLC30A6Q6NXT4 461 aa14.39□□□□□ -0.11
GARNL3-215ENST00000478702 ZNF585AQ6P3V2 769 aa14.39□□□□□ -0.11
GARNL3-215ENST00000478702 PACS2Q86VP3 889 aa14.39□□□□□ -0.11
GARNL3-215ENST00000478702 SLC44A2Q8IWA5 706 aaPredicted RBP14.39□□□□□ -0.11
GARNL3-215ENST00000478702 OR10Q1Q8NGQ4 319 aa14.39□□□□□ -0.11
GARNL3-215ENST00000478702 RNF138Q8WVD3 245 aa14.39□□□□□ -0.11
GARNL3-215ENST00000478702 TUBGCP3Q96CW5 907 aa14.39□□□□□ -0.11
GARNL3-215ENST00000478702 SLC6A15Q9H2J7 730 aa14.39□□□□□ -0.11
GARNL3-215ENST00000478702 GSX1Q9H4S2 264 aaPredicted RBP14.39□□□□□ -0.11
GARNL3-215ENST00000478702 TMBIM4Q9HC24 238 aa14.39□□□□□ -0.11
GARNL3-215ENST00000478702 ACKR4Q9NPB9 350 aa14.39□□□□□ -0.11
GARNL3-215ENST00000478702 DLL4Q9NR61 685 aa14.39□□□□□ -0.11
GARNL3-215ENST00000478702 ACSS1Q9NUB1 689 aaPredicted RBP14.39□□□□□ -0.11
GARNL3-215ENST00000478702 ASIC5Q9NY37 505 aa14.39□□□□□ -0.11
GARNL3-215ENST00000478702 KLRF1Q9NZS2 232 aa14.39□□□□□ -0.11
GARNL3-215ENST00000478702 SPRR3Q9UBC9 169 aa14.39□□□□□ -0.11
GARNL3-215ENST00000478702 ST6GALNAC2Q9UJ37 374 aa14.39□□□□□ -0.11
GARNL3-215ENST00000478702 DNHD1Q96M86 4753 aa14.38□□□□□ -0.11
GARNL3-215ENST00000478702 SNPHO15079 494 aa14.38□□□□□ -0.11
GARNL3-215ENST00000478702 REM1O75628 298 aa14.38□□□□□ -0.11
GARNL3-215ENST00000478702 PTPN6P29350 595 aa14.38□□□□□ -0.11
GARNL3-215ENST00000478702 IL12BP29460 328 aa14.38□□□□□ -0.11
GARNL3-215ENST00000478702 KRT20P35900 424 aa14.38□□□□□ -0.11
GARNL3-215ENST00000478702 CDK9P50750 372 aaKnown RBP14.38□□□□□ -0.11
GARNL3-215ENST00000478702 BST1Q10588 318 aa14.38□□□□□ -0.11
GARNL3-215ENST00000478702 FOXD4Q12950 439 aaPredicted RBP14.38□□□□□ -0.11
GARNL3-215ENST00000478702 MAD2L1Q13257 205 aaPredicted RBP14.38□□□□□ -0.11
GARNL3-215ENST00000478702 STX3Q13277 289 aa14.38□□□□□ -0.11
GARNL3-215ENST00000478702 HHATQ5VTY9 493 aa14.38□□□□□ -0.11
GARNL3-215ENST00000478702 IL23RQ5VWK5 629 aa14.38□□□□□ -0.11
GARNL3-215ENST00000478702 TIGD3Q6B0B8 471 aa14.38□□□□□ -0.11
GARNL3-215ENST00000478702 ANGPTL8Q6UXH0 198 aa14.38□□□□□ -0.11
GARNL3-215ENST00000478702 B3GNT6Q6ZMB0 384 aa14.38□□□□□ -0.11
GARNL3-215ENST00000478702 LARP4Q71RC2 724 aaKnown RBP eCLIP14.38□□□□□ -0.11
GARNL3-215ENST00000478702 ZZZ3Q8IYH5 903 aa14.38□□□□□ -0.11
GARNL3-215ENST00000478702 OR4N2Q8NGD1 307 aa14.38□□□□□ -0.11
GARNL3-215ENST00000478702 HOXB13Q92826 284 aaPredicted RBP14.38□□□□□ -0.11
GARNL3-215ENST00000478702 SARAFQ96BY9 339 aa14.38□□□□□ -0.11
GARNL3-215ENST00000478702 TMCO6Q96DC7 493 aa14.38□□□□□ -0.11
GARNL3-215ENST00000478702 ADOQ96SZ5 270 aa14.38□□□□□ -0.11
GARNL3-215ENST00000478702 LMF2Q9BU23 707 aaKnown RBP14.38□□□□□ -0.11
GARNL3-215ENST00000478702 LDAHQ9H6V9 325 aa14.38□□□□□ -0.11
GARNL3-215ENST00000478702 SLC24A3Q9HC58 644 aa14.38□□□□□ -0.11
GARNL3-215ENST00000478702 GALNT9Q9HCQ5 603 aa14.38□□□□□ -0.11
GARNL3-215ENST00000478702 SH3BP4Q9P0V3 963 aa14.38□□□□□ -0.11
GARNL3-215ENST00000478702 OR10H1Q9Y4A9 318 aa14.38□□□□□ -0.11
GARNL3-215ENST00000478702 DOCK7Q96N67 2140 aa14.38□□□□□ -0.11
GARNL3-215ENST00000478702 ABCA2Q9BZC7 2435 aa14.37□□□□□ -0.11
GARNL3-215ENST00000478702 MED12Q93074 2177 aa14.37□□□□□ -0.11
GARNL3-215ENST00000478702 TTC36A6NLP5 189 aa14.37□□□□□ -0.11
GARNL3-215ENST00000478702 FIGNL2A6NMB9 653 aa14.37□□□□□ -0.11
GARNL3-215ENST00000478702 ICOSLGO75144 302 aa14.37□□□□□ -0.11
GARNL3-215ENST00000478702 HPNP05981 417 aa14.37□□□□□ -0.11
GARNL3-215ENST00000478702 GPC1P35052 558 aa14.37□□□□□ -0.11
GARNL3-215ENST00000478702 RPL14P50914 215 aaKnown RBP14.37□□□□□ -0.11
GARNL3-215ENST00000478702 PNLIPRP2P54317 469 aa14.37□□□□□ -0.11
GARNL3-215ENST00000478702 MANFP55145 182 aaKnown RBP14.37□□□□□ -0.11
GARNL3-215ENST00000478702 C21orf58P58505 322 aa14.37□□□□□ -0.11
GARNL3-215ENST00000478702 MAGOHP61326 146 aaKnown RBP14.37□□□□□ -0.11
GARNL3-215ENST00000478702 MRPS22P82650 360 aaKnown RBP14.37□□□□□ -0.11
GARNL3-215ENST00000478702 ZNHIT3Q15649 155 aaPredicted RBP14.37□□□□□ -0.11
GARNL3-215ENST00000478702 SMU1Q2TAY7 513 aa14.37□□□□□ -0.11
GARNL3-215ENST00000478702 ARSKQ6UWY0 536 aa14.37□□□□□ -0.11
GARNL3-215ENST00000478702 CHDHQ8NE62 594 aaPredicted RBP14.37□□□□□ -0.11
GARNL3-215ENST00000478702 OR7A2PQ8NGA2 310 aa14.37□□□□□ -0.11
GARNL3-215ENST00000478702 NEIL3Q8TAT5 605 aa14.37□□□□□ -0.11
GARNL3-215ENST00000478702 EFHD2Q96C19 240 aaPredicted RBP14.37□□□□□ -0.11
GARNL3-215ENST00000478702 MS4A4EQ96PG1 132 aa14.37□□□□□ -0.11
GARNL3-215ENST00000478702 PAIP2Q9BPZ3 127 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms