RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 LDAHQ9H6V9 325 aa11.63□□□□□ -0.55
USP11-206ENST00000469080 SDHAF2Q9NX18 166 aa11.63□□□□□ -0.55
USP11-206ENST00000469080 ENTPD4Q9Y227 616 aa11.63□□□□□ -0.55
USP11-206ENST00000469080 A0A1W2PS29 197 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 CACNB4O00305 520 aaPredicted RBP11.62□□□□□ -0.55
USP11-206ENST00000469080 ANKRD28O15084 1053 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 HRGP04196 525 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 RB1P06400 928 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 OR12D1P0DN82 309 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 ZP3P21754 424 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 RYKP34925 604 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 ATP6V1E1P36543 226 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 LIPAP38571 399 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 CLEC12AQ5QGZ9 265 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 PDZK1Q5T2W1 519 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 HACD2Q6Y1H2 254 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 TMPRSS11AQ6ZMR5 421 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 KRT77Q7Z794 578 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 CYP4Z1Q86W10 505 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 C2CD4CQ8TF44 421 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 C16orf78Q8WTQ4 265 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 SLC38A4Q969I6 547 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 WDR77Q9BQA1 342 aaPredicted RBP11.62□□□□□ -0.55
USP11-206ENST00000469080 AMBRA1Q9C0C7 1298 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 GALNT9Q9HCQ5 603 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 CTSFQ9UBX1 484 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 SEC14L3Q9UDX4 400 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 SAMD4AQ9UPU9 718 aaKnown RBP11.62□□□□□ -0.55
USP11-206ENST00000469080 CSNK1G3Q9Y6M4 447 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 HEATR5BQ9P2D3 2071 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 ARID1AO14497 2285 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 HYAL3O43820 417 aaPredicted RBP11.62□□□□□ -0.55
USP11-206ENST00000469080 RAF1P04049 648 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 HNRNPA1P09651 372 aaKnown RBP eCLIP11.62□□□□□ -0.55
USP11-206ENST00000469080 IDSP22304 550 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 DDX6P26196 483 aaKnown RBP eCLIP11.62□□□□□ -0.551e-8■□□□□ 10.7
USP11-206ENST00000469080 ACSL1P33121 698 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 PIK3CBP42338 1070 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 NCBP2P52298 156 aaKnown RBP eCLIP11.62□□□□□ -0.55
USP11-206ENST00000469080 BTN3A2P78410 334 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 HTRA4P83105 476 aaPredicted RBP11.62□□□□□ -0.55
USP11-206ENST00000469080 CDK6Q00534 326 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 CDK5R2Q13319 367 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 KIAA0040Q15053 153 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 ETFDHQ16134 617 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 RFX4Q33E94 735 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 ITPRIPL2Q3MIP1 535 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 DEFB134Q4QY38 66 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 NXPE4Q6UWF7 544 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 FAM131AQ6UXB0 335 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 TECPR1Q7Z6L1 1165 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 INSM2Q96T92 566 aaPredicted RBP11.62□□□□□ -0.55
USP11-206ENST00000469080 FEVQ99581 238 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 SHARPINQ9H0F6 387 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 OR51E2Q9H255 320 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 ZCCHC4Q9H5U6 513 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 MRPS30Q9NP92 439 aaKnown RBP11.62□□□□□ -0.55
USP11-206ENST00000469080 ADAP2Q9NPF8 381 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 A0A1W2PPL8 197 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 GFYI3L273 518 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 MYL12BO14950 172 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 SIGLEC5O15389 551 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 LCMT2O60294 686 aaKnown RBP11.62□□□□□ -0.55
USP11-206ENST00000469080 ALPLP05186 524 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 PRR35P0CG20 571 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 MYL12AP19105 171 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 CASP6P55212 293 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 SIGLEC14Q08ET2 396 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 SRSF5Q13243 272 aaKnown RBP11.62□□□□□ -0.55
USP11-206ENST00000469080 SYT6Q5T7P8 510 aaPredicted RBP11.62□□□□□ -0.55
USP11-206ENST00000469080 SLCO4C1Q6ZQN7 724 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 RBM45Q8IUH3 476 aaKnown RBP11.62□□□□□ -0.55
USP11-206ENST00000469080 STX19Q8N4C7 294 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 REPS1Q96D71 796 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 ART5Q96L15 291 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 GULP1Q9UBP9 304 aa11.62□□□□□ -0.55
USP11-206ENST00000469080 A0A096LPI6 279 aa11.61□□□□□ -0.55
USP11-206ENST00000469080 hCG_1807616A0A1W2PRN6 198 aa11.61□□□□□ -0.55
USP11-206ENST00000469080 QSOX1O00391 747 aa11.61□□□□□ -0.55
USP11-206ENST00000469080 SCAMP2O15127 329 aaKnown RBP11.61□□□□□ -0.55
USP11-206ENST00000469080 PCDHGA12O60330 932 aa11.61□□□□□ -0.55
USP11-206ENST00000469080 UMPSP11172 480 aa11.61□□□□□ -0.55
USP11-206ENST00000469080 HPGDP15428 266 aa11.61□□□□□ -0.55
USP11-206ENST00000469080 RAB3BP20337 219 aa11.61□□□□□ -0.55
USP11-206ENST00000469080 AVPR1BP47901 424 aa11.61□□□□□ -0.55
USP11-206ENST00000469080 RAB13P51153 203 aa11.61□□□□□ -0.55
USP11-206ENST00000469080 ALKBH1Q13686 389 aaKnown RBP11.61□□□□□ -0.55
USP11-206ENST00000469080 MED22Q15528 200 aa11.61□□□□□ -0.55
USP11-206ENST00000469080 TEAD4Q15561 434 aa11.61□□□□□ -0.55
USP11-206ENST00000469080 SMAD2Q15796 467 aaKnown RBP11.61□□□□□ -0.55
USP11-206ENST00000469080 GCNT6Q5T4J0 391 aa11.61□□□□□ -0.55
USP11-206ENST00000469080 MAMDC2Q7Z304 686 aaPredicted RBP11.61□□□□□ -0.55
USP11-206ENST00000469080 TRIM46Q7Z4K8 759 aa11.61□□□□□ -0.55
USP11-206ENST00000469080 MND1Q9BWT6 205 aa11.61□□□□□ -0.55
USP11-206ENST00000469080 SLC17A9Q9BYT1 436 aa11.61□□□□□ -0.55
USP11-206ENST00000469080 KLHL31Q9H511 634 aa11.61□□□□□ -0.55
USP11-206ENST00000469080 ACOT13Q9NPJ3 140 aa11.61□□□□□ -0.55
USP11-206ENST00000469080 BIN3Q9NQY0 253 aa11.61□□□□□ -0.55
USP11-206ENST00000469080 AHSPQ9NZD4 102 aa11.61□□□□□ -0.55
USP11-206ENST00000469080 GLS2Q9UI32 602 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms