RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 NEIL3Q8TAT5 605 aa16.79■□□□□ 0.28
COL9A2-205ENST00000461118 RNF138Q8WVD3 245 aa16.79■□□□□ 0.28
COL9A2-205ENST00000461118 HOXB13Q92826 284 aaPredicted RBP16.79■□□□□ 0.28
COL9A2-205ENST00000461118 SARAFQ96BY9 339 aa16.79■□□□□ 0.28
COL9A2-205ENST00000461118 GNRHR2Q96P88 292 aa16.79■□□□□ 0.28
COL9A2-205ENST00000461118 ADOQ96SZ5 270 aa16.79■□□□□ 0.28
COL9A2-205ENST00000461118 LMF2Q9BU23 707 aaKnown RBP16.79■□□□□ 0.28
COL9A2-205ENST00000461118 C15orf41Q9Y2V0 281 aa16.79■□□□□ 0.28
COL9A2-205ENST00000461118 PCDHGB3Q9Y5G1 929 aa16.79■□□□□ 0.28
COL9A2-205ENST00000461118 PRAMEF25A6NGN4 478 aa16.78■□□□□ 0.28
COL9A2-205ENST00000461118 HOXD4P09016 255 aaPredicted RBP16.78■□□□□ 0.28
COL9A2-205ENST00000461118 PRPS1L1P21108 318 aa16.78■□□□□ 0.28
COL9A2-205ENST00000461118 ENDOUP21128 410 aaKnown RBP16.78■□□□□ 0.28
COL9A2-205ENST00000461118 GDF1P27539 372 aa16.78■□□□□ 0.28
COL9A2-205ENST00000461118 PTPN6P29350 595 aa16.78■□□□□ 0.28
COL9A2-205ENST00000461118 CHRNB4P30926 498 aa16.78■□□□□ 0.28
COL9A2-205ENST00000461118 HPCAL1P37235 193 aa16.78■□□□□ 0.28
COL9A2-205ENST00000461118 MAP3K8P41279 467 aa16.78■□□□□ 0.28
COL9A2-205ENST00000461118 MASP1P48740 699 aa16.78■□□□□ 0.28
COL9A2-205ENST00000461118 C21orf58P58505 322 aa16.78■□□□□ 0.28
COL9A2-205ENST00000461118 MAGOHP61326 146 aaKnown RBP16.78■□□□□ 0.28
COL9A2-205ENST00000461118 MRPS22P82650 360 aaKnown RBP16.78■□□□□ 0.28
COL9A2-205ENST00000461118 BST1Q10588 318 aa16.78■□□□□ 0.28
COL9A2-205ENST00000461118 ZNF155Q12901 538 aaPredicted RBP16.78■□□□□ 0.28
COL9A2-205ENST00000461118 HSPB3Q12988 150 aa16.78■□□□□ 0.28
COL9A2-205ENST00000461118 GAB1Q13480 694 aa16.78■□□□□ 0.28
COL9A2-205ENST00000461118 TMEM211Q6ICI0 200 aa16.78■□□□□ 0.28
COL9A2-205ENST00000461118 LARP4Q71RC2 724 aaKnown RBP eCLIP16.78■□□□□ 0.28
COL9A2-205ENST00000461118 CCDC71Q8IV32 467 aaPredicted RBP16.78■□□□□ 0.28
COL9A2-205ENST00000461118 RIMKLAQ8IXN7 391 aa16.78■□□□□ 0.28
COL9A2-205ENST00000461118 LRRC34Q8IZ02 419 aa16.78■□□□□ 0.28
COL9A2-205ENST00000461118 ANKRD42Q8N9B4 389 aa16.78■□□□□ 0.28
COL9A2-205ENST00000461118 OR4N2Q8NGD1 307 aa16.78■□□□□ 0.28
COL9A2-205ENST00000461118 OR1J4Q8NGS1 313 aa16.78■□□□□ 0.28
COL9A2-205ENST00000461118 CEP70Q8NHQ1 597 aa16.78■□□□□ 0.28
COL9A2-205ENST00000461118 ASB5Q8WWX0 329 aa16.78■□□□□ 0.28
COL9A2-205ENST00000461118 COQ8BQ96D53 544 aa16.78■□□□□ 0.28
COL9A2-205ENST00000461118 PAIP2Q9BPZ3 127 aaKnown RBP16.78■□□□□ 0.28
COL9A2-205ENST00000461118 C1orf50Q9BV19 199 aa16.78■□□□□ 0.28
COL9A2-205ENST00000461118 OSBPL11Q9BXB4 747 aa16.78■□□□□ 0.28
COL9A2-205ENST00000461118 CXXC4Q9H2H0 198 aa16.78■□□□□ 0.28
COL9A2-205ENST00000461118 PNPLA3Q9NST1 481 aa16.78■□□□□ 0.28
COL9A2-205ENST00000461118 EIF3LQ9Y262 564 aaKnown RBP16.78■□□□□ 0.28
COL9A2-205ENST00000461118 OR10H1Q9Y4A9 318 aa16.78■□□□□ 0.28
COL9A2-205ENST00000461118 FAM90A27PA6NNH2 459 aa16.77■□□□□ 0.28
COL9A2-205ENST00000461118 SNPHO15079 494 aa16.77■□□□□ 0.28
COL9A2-205ENST00000461118 IL12BP29460 328 aa16.77■□□□□ 0.28
COL9A2-205ENST00000461118 GPC1P35052 558 aa16.77■□□□□ 0.28
COL9A2-205ENST00000461118 CDK9P50750 372 aaKnown RBP16.77■□□□□ 0.28
COL9A2-205ENST00000461118 IST1P53990 364 aa16.77■□□□□ 0.28
COL9A2-205ENST00000461118 ZNHIT3Q15649 155 aaPredicted RBP16.77■□□□□ 0.28
COL9A2-205ENST00000461118 PDCD2Q16342 344 aaPredicted RBP16.77■□□□□ 0.28
COL9A2-205ENST00000461118 OR7A2PQ8NGA2 310 aa16.77■□□□□ 0.28
COL9A2-205ENST00000461118 RAB3IL1Q8TBN0 382 aa16.77■□□□□ 0.28
COL9A2-205ENST00000461118 PRPF18Q99633 342 aaKnown RBP16.77■□□□□ 0.28
COL9A2-205ENST00000461118 EXO5Q9H790 373 aa16.77■□□□□ 0.28
COL9A2-205ENST00000461118 AKTIPQ9H8T0 292 aa16.77■□□□□ 0.28
COL9A2-205ENST00000461118 C3orf14Q9HBI5 128 aa16.77■□□□□ 0.28
COL9A2-205ENST00000461118 Q9N2J8 555 aa16.77■□□□□ 0.28
COL9A2-205ENST00000461118 ATAD3AQ9NVI7 634 aa16.77■□□□□ 0.28
COL9A2-205ENST00000461118 NOP53Q9NZM5 478 aaKnown RBP16.77■□□□□ 0.28
COL9A2-205ENST00000461118 KLRF1Q9NZS2 232 aa16.77■□□□□ 0.28
COL9A2-205ENST00000461118 SPRR3Q9UBC9 169 aa16.77■□□□□ 0.28
COL9A2-205ENST00000461118 KCNN3Q9UGI6 736 aa16.77■□□□□ 0.28
COL9A2-205ENST00000461118 ACAD8Q9UKU7 415 aa16.77■□□□□ 0.28
COL9A2-205ENST00000461118 CBLCQ9ULV8 474 aa16.77■□□□□ 0.28
COL9A2-205ENST00000461118 VPS13CQ709C8 3753 aa16.76■□□□□ 0.27
COL9A2-205ENST00000461118 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.76■□□□□ 0.27
COL9A2-205ENST00000461118 A0A1W2PRB8 838 aa16.76■□□□□ 0.27
COL9A2-205ENST00000461118 SNNO75324 88 aaPredicted RBP16.76■□□□□ 0.27
COL9A2-205ENST00000461118 CBR3O75828 277 aa16.76■□□□□ 0.27
COL9A2-205ENST00000461118 LAMP1P11279 417 aa16.76■□□□□ 0.27
COL9A2-205ENST00000461118 G6PDP11413 515 aa16.76■□□□□ 0.27
COL9A2-205ENST00000461118 CLDN8P56748 225 aa16.76■□□□□ 0.27
COL9A2-205ENST00000461118 NUP107P57740 925 aa16.76■□□□□ 0.27
COL9A2-205ENST00000461118 DECR1Q16698 335 aa16.76■□□□□ 0.27
COL9A2-205ENST00000461118 WLSQ5T9L3 541 aa16.76■□□□□ 0.27
COL9A2-205ENST00000461118 CPTPQ5TA50 214 aa16.76■□□□□ 0.27
COL9A2-205ENST00000461118 ANGPTL8Q6UXH0 198 aa16.76■□□□□ 0.27
COL9A2-205ENST00000461118 WDSUB1Q8N9V3 476 aa16.76■□□□□ 0.27
COL9A2-205ENST00000461118 NUP43Q8NFH3 380 aa16.76■□□□□ 0.27
COL9A2-205ENST00000461118 PSMA8Q8TAA3 256 aa16.76■□□□□ 0.27
COL9A2-205ENST00000461118 RND1Q92730 232 aa16.76■□□□□ 0.27
COL9A2-205ENST00000461118 EFHD2Q96C19 240 aaPredicted RBP16.76■□□□□ 0.27
COL9A2-205ENST00000461118 GIMAP5Q96F15 307 aa16.76■□□□□ 0.27
COL9A2-205ENST00000461118 SLC6A15Q9H2J7 730 aa16.76■□□□□ 0.27
COL9A2-205ENST00000461118 GALNT9Q9HCQ5 603 aa16.76■□□□□ 0.27
COL9A2-205ENST00000461118 THAP1Q9NVV9 213 aa16.76■□□□□ 0.27
COL9A2-205ENST00000461118 MRTO4Q9UKD2 239 aaKnown RBP16.76■□□□□ 0.27
COL9A2-205ENST00000461118 MAPRE3Q9UPY8 281 aa16.76■□□□□ 0.27
COL9A2-205ENST00000461118 DNHD1Q96M86 4753 aa16.76■□□□□ 0.27
COL9A2-205ENST00000461118 NUP214P35658 2090 aaPredicted RBP16.75■□□□□ 0.27
COL9A2-205ENST00000461118 FAM221AA4D161 298 aa16.75■□□□□ 0.27
COL9A2-205ENST00000461118 FIGNL2A6NMB9 653 aa16.75■□□□□ 0.27
COL9A2-205ENST00000461118 GNB5O14775 395 aa16.75■□□□□ 0.27
COL9A2-205ENST00000461118 EMC8O43402 210 aa16.75■□□□□ 0.27
COL9A2-205ENST00000461118 WDR1O75083 606 aa16.75■□□□□ 0.27
COL9A2-205ENST00000461118 TRAPPC6AO75865 159 aa16.75■□□□□ 0.27
COL9A2-205ENST00000461118 NKX2-2O95096 273 aa16.75■□□□□ 0.27
COL9A2-205ENST00000461118 IL33O95760 270 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms