RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 ADAP00813 363 aa24.64■■□□□ 1.53
LDB1-202ENST00000425280 THBS1P07996 1170 aa24.64■■□□□ 1.53
LDB1-202ENST00000425280 GABARAPL2P60520 117 aa24.64■■□□□ 1.53
LDB1-202ENST00000425280 EEF1A1P68104 462 aaKnown RBP24.64■■□□□ 1.53
LDB1-202ENST00000425280 PSG6Q00889 435 aa24.64■■□□□ 1.53
LDB1-202ENST00000425280 B3GNT8Q7Z7M8 397 aa24.64■■□□□ 1.53
LDB1-202ENST00000425280 EID2Q8N6I1 236 aa24.64■■□□□ 1.53
LDB1-202ENST00000425280 BPIFB6Q8NFQ5 453 aa24.64■■□□□ 1.53
LDB1-202ENST00000425280 YIPF3Q9GZM5 350 aa24.64■■□□□ 1.53
LDB1-202ENST00000425280 FGF21Q9NSA1 209 aa24.64■■□□□ 1.53
LDB1-202ENST00000425280 GMEB2Q9UKD1 530 aa24.64■■□□□ 1.53
LDB1-202ENST00000425280 FBXO4Q9UKT5 387 aa24.64■■□□□ 1.53
LDB1-202ENST00000425280 MGAT4BQ9UQ53 548 aa24.64■■□□□ 1.53
LDB1-202ENST00000425280 ZDBF2Q9HCK1 2354 aa24.63■■□□□ 1.53
LDB1-202ENST00000425280 CCDC159P0C7I6 412 aa24.63■■□□□ 1.53
LDB1-202ENST00000425280 FMO3P31513 532 aa24.63■■□□□ 1.53
LDB1-202ENST00000425280 GSSP48637 474 aa24.63■■□□□ 1.53
LDB1-202ENST00000425280 CCL7P80098 99 aa24.63■■□□□ 1.53
LDB1-202ENST00000425280 SERTAD2Q14140 314 aa24.63■■□□□ 1.53
LDB1-202ENST00000425280 PGBD2Q6P3X8 592 aa24.63■■□□□ 1.53
LDB1-202ENST00000425280 MED25Q71SY5 747 aa24.63■■□□□ 1.53
LDB1-202ENST00000425280 VSTM2LQ96N03 204 aa24.63■■□□□ 1.53
LDB1-202ENST00000425280 KCNE5Q9UJ90 142 aa24.63■■□□□ 1.53
LDB1-202ENST00000425280 CDC14AQ9UNH5 594 aa24.63■■□□□ 1.53
LDB1-202ENST00000425280 A0A1W2PQM1 296 aa24.63■■□□□ 1.53
LDB1-202ENST00000425280 IFNA16P05015 189 aa24.63■■□□□ 1.53
LDB1-202ENST00000425280 HOXD12P35452 270 aa24.63■■□□□ 1.53
LDB1-202ENST00000425280 RGS8P57771 180 aaPredicted RBP24.63■■□□□ 1.53
LDB1-202ENST00000425280 CNPY1Q3B7I2 92 aa24.63■■□□□ 1.53
LDB1-202ENST00000425280 ENTHD1Q8IYW4 607 aa24.63■■□□□ 1.53
LDB1-202ENST00000425280 DGCR14Q96DF8 476 aaKnown RBP24.63■■□□□ 1.53
LDB1-202ENST00000425280 OR1F2PQ96R84 312 aa24.63■■□□□ 1.53
LDB1-202ENST00000425280 CNPPD1Q9BV87 410 aa24.63■■□□□ 1.53
LDB1-202ENST00000425280 RASSF1Q9NS23 344 aa24.63■■□□□ 1.53
LDB1-202ENST00000425280 ENOPH1Q9UHY7 261 aa24.63■■□□□ 1.53
LDB1-202ENST00000425280 DTX4Q9Y2E6 619 aa24.63■■□□□ 1.53
LDB1-202ENST00000425280 NPIPA5A0A0B4J1W7 369 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 NPIPA7E9PJI5 369 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 DSCR3O14972 297 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 BRINP1O60477 761 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 SOX30O94993 753 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 KCNK2O95069 426 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 DBIP07108 87 aaKnown RBP24.62■■□□□ 1.53
LDB1-202ENST00000425280 NPIPA8P0DM63 369 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 PGDP52209 483 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 TAS2R41P59536 307 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 HOXC5Q00444 222 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 DSG2Q14126 1118 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 ZNHIT3Q15649 155 aaPredicted RBP24.62■■□□□ 1.53
LDB1-202ENST00000425280 BROXQ5VW32 411 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 BORAQ6PGQ7 559 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 ZC3H14Q6PJT7 736 aaKnown RBP24.62■■□□□ 1.53
LDB1-202ENST00000425280 KCTD8Q6ZWB6 473 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 NR4A3Q92570 626 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 PTCHD1Q96NR3 888 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 UCK2Q9BZX2 261 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 ERVK-19Q9WJR5 959 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 RNF6Q9Y252 685 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 PEX12O00623 359 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 XPNPEP2O43895 674 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 RPLP0P05388 317 aaKnown RBP24.62■■□□□ 1.53
LDB1-202ENST00000425280 GALNSP34059 522 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 TRHRP34981 398 aaPredicted RBP24.62■■□□□ 1.53
LDB1-202ENST00000425280 FUT7Q11130 342 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 MORN4Q8NDC4 146 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 CEP76Q8TAP6 659 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 DIO2Q92813 273 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 CNDP2Q96KP4 475 aaKnown RBP24.62■■□□□ 1.53
LDB1-202ENST00000425280 ZNF578Q96N58 590 aaPredicted RBP24.62■■□□□ 1.53
LDB1-202ENST00000425280 PELOQ9BRX2 385 aaKnown RBP24.62■■□□□ 1.53
LDB1-202ENST00000425280 POLE3Q9NRF9 147 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 PAK1IP1Q9NWT1 392 aaPredicted RBP24.62■■□□□ 1.53
LDB1-202ENST00000425280 REV1Q9UBZ9 1251 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 FTSJ1Q9UET6 329 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 MMACHCQ9Y4U1 282 aa24.62■■□□□ 1.53
LDB1-202ENST00000425280 CPSF4LA6NMK7 179 aaKnown RBP24.61■■□□□ 1.53
LDB1-202ENST00000425280 PRAMEF2O60811 474 aa24.61■■□□□ 1.53
LDB1-202ENST00000425280 CPNE6O95741 557 aa24.61■■□□□ 1.53
LDB1-202ENST00000425280 HTR1AP08908 422 aa24.61■■□□□ 1.53
LDB1-202ENST00000425280 CCNYL3P0C7X3 344 aa24.61■■□□□ 1.53
LDB1-202ENST00000425280 UGT2B15P54855 530 aa24.61■■□□□ 1.53
LDB1-202ENST00000425280 BIKQ13323 160 aa24.61■■□□□ 1.53
LDB1-202ENST00000425280 EIPR1Q53HC9 387 aa24.61■■□□□ 1.53
LDB1-202ENST00000425280 AP1ARQ63HQ0 302 aa24.61■■□□□ 1.53
LDB1-202ENST00000425280 ZAR1Q86SH2 424 aa24.61■■□□□ 1.53
LDB1-202ENST00000425280 NLGN4XQ8N0W4 816 aa24.61■■□□□ 1.53
LDB1-202ENST00000425280 APH1BQ8WW43 257 aa24.61■■□□□ 1.53
LDB1-202ENST00000425280 DGCR6LQ9BY27 220 aa24.61■■□□□ 1.53
LDB1-202ENST00000425280 FANCEQ9HB96 536 aa24.61■■□□□ 1.53
LDB1-202ENST00000425280 ZNF304Q9HCX3 659 aa24.61■■□□□ 1.53
LDB1-202ENST00000425280 NTNG1Q9Y2I2 539 aa24.61■■□□□ 1.53
LDB1-202ENST00000425280 MUC3AQ02505 3323 aa24.6■■□□□ 1.53
LDB1-202ENST00000425280 ABCB7O75027 752 aa24.6■■□□□ 1.53
LDB1-202ENST00000425280 WBP4O75554 376 aaKnown RBP24.6■■□□□ 1.53
LDB1-202ENST00000425280 FBLP22087 321 aaKnown RBP24.6■■□□□ 1.53
LDB1-202ENST00000425280 CXCR4P61073 352 aa24.6■■□□□ 1.53
LDB1-202ENST00000425280 ESRRGP62508 458 aa24.6■■□□□ 1.53
LDB1-202ENST00000425280 PROX2Q3B8N5 592 aa24.6■■□□□ 1.53
LDB1-202ENST00000425280 YOD1Q5VVQ6 348 aaPredicted RBP24.6■■□□□ 1.53
LDB1-202ENST00000425280 OR4K5Q8NGD3 323 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms