RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 ZNF311Q5JNZ3 666 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 TIMM23BQ5SRD1 257 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 PDSS1Q5T2R2 415 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 MFSD12Q6NUT3 480 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 NEPROQ6NW34 567 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 TFAP2EQ6VUC0 442 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 SPATC1Q76KD6 591 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 GPR180Q86V85 440 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 WDR75Q8IWA0 830 aaKnown RBP5.56□□□□□ -1.52
SDCBP-203ENST00000424270 KLHDC8BQ8IXV7 354 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 UBE2J2Q8N2K1 259 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 METTL25Q8N6Q8 603 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 SIGLECL1Q8N7X8 197 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 OR10D3Q8NH80 312 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.56□□□□□ -1.52
SDCBP-203ENST00000424270 CD200R1Q8TD46 325 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 WDR60Q8WVS4 1066 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 HGDQ93099 445 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 FBXL8Q96CD0 374 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 MFSD3Q96ES6 412 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 RBM4BQ9BQ04 359 aaKnown RBP5.56□□□□□ -1.52
SDCBP-203ENST00000424270 KCNS3Q9BQ31 491 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 CENPKQ9BS16 269 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 TBCDQ9BTW9 1192 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 OSBPL8Q9BZF1 889 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 BRINP2Q9C0B6 783 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 IL22Q9GZX6 179 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 ZMAT3Q9HA38 289 aaKnown RBP5.56□□□□□ -1.52
SDCBP-203ENST00000424270 SLC52A3Q9NQ40 469 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 RAB6BQ9NRW1 208 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 TREX1Q9NSU2 369 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 SYBUQ9NX95 663 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 NPAP1Q9NZP6 1156 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 GMPR2Q9P2T1 348 aaKnown RBP5.56□□□□□ -1.52
SDCBP-203ENST00000424270 ZDHHC2Q9UIJ5 367 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 MID2Q9UJV3 735 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 CFL2Q9Y281 166 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 MRPS18CQ9Y3D5 142 aaKnown RBP5.56□□□□□ -1.52
SDCBP-203ENST00000424270 AP4B1Q9Y6B7 739 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 ALPK2Q86TB3 2170 aa5.56□□□□□ -1.52
SDCBP-203ENST00000424270 TRAV20A0A0B4J274 112 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 A0A0G2JMP0 313 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 A0A0X1KG70 313 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 DNAJC9-AS1A6NH13 148 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 TNFSF11O14788 317 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 RAD51DO75771 328 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 PRSS23O95084 383 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 SLU7O95391 586 aaKnown RBP5.55□□□□□ -1.52
SDCBP-203ENST00000424270 NR2F6P10588 404 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 PCNAP12004 261 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 MTHFD2P13995 350 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 PGCP20142 388 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 GPX3P22352 226 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 ME2P23368 584 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 PIK3R1P27986 724 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 IGLV3-21P80748 117 aaPredicted RBP5.55□□□□□ -1.52
SDCBP-203ENST00000424270 ZBED6P86452 979 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 IL1RL1Q01638 556 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 TNFRSF17Q02223 184 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 DUSP2Q05923 314 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 GANABQ14697 944 aaKnown RBP5.55□□□□□ -1.52
SDCBP-203ENST00000424270 HIST2H2ACQ16777 129 aaPredicted RBP5.55□□□□□ -1.52
SDCBP-203ENST00000424270 ZSWIM7Q19AV6 140 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 C18orf63Q68DL7 685 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 HBMQ6B0K9 141 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 HIST2H2AA3Q6FI13 130 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 TMEM81Q6P7N7 255 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 VHLLQ6RSH7 139 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 CYP20A1Q6UW02 462 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 FRA10AC1Q70Z53 315 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 CENPUQ71F23 418 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 APTXQ7Z2E3 356 aaKnown RBP5.55□□□□□ -1.52
SDCBP-203ENST00000424270 NUFIP2Q7Z417 695 aaKnown RBP5.55□□□□□ -1.52
SDCBP-203ENST00000424270 C1QL2Q7Z5L3 287 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 GALNT10Q86SR1 603 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 P2RY8Q86VZ1 359 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 TREML1Q86YW5 311 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 TUSC5Q8IXB3 177 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 CCDC89Q8N998 374 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 OR4M2Q8NGB6 313 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 ATG4AQ8WYN0 398 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 TAF15Q92804 592 aaKnown RBP eCLIP5.55□□□□□ -1.52
SDCBP-203ENST00000424270 TMBIM1Q969X1 311 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 ADIPOR1Q96A54 375 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 ADOQ96SZ5 270 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 NDNQ99608 321 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 ITPAQ9BY32 194 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 DDX47Q9H0S4 455 aaKnown RBP5.55□□□□□ -1.52
SDCBP-203ENST00000424270 TMEM185BQ9H7F4 350 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 DYNLRB1Q9NP97 96 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 PRDM7Q9NQW5 492 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 SDHAF3Q9NRP4 125 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 ANO10Q9NW15 660 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 TAS2R16Q9NYV7 291 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 MED11Q9P086 117 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 CORO1CQ9ULV4 474 aaPredicted RBP5.55□□□□□ -1.52
SDCBP-203ENST00000424270 TRAF6Q9Y4K3 522 aa5.55□□□□□ -1.52
SDCBP-203ENST00000424270 OR5H1A6NKK0 313 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 SHISA8B8ZZ34 492 aa5.54□□□□□ -1.52
SDCBP-203ENST00000424270 ATP6V1G2-DDX39BF2Z307 99 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms