RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 GBX2P52951 348 aaPredicted RBP2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 ARFIP1P53367 373 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 CBX1P83916 185 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 ZNF85Q03923 595 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 HYAL1Q12794 435 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 SIX1Q15475 284 aaPredicted RBP2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 UBE2V2Q15819 145 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 ZIC1Q15915 447 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 MICAQ29983 383 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 USH1GQ495M9 461 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 LINC01620Q4KN68 170 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 CEP55Q53EZ4 464 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 RABGAP1LQ5R372 815 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 GFI1BQ5VTD9 330 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 DOK6Q6PKX4 331 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 GCNT7Q6ZNI0 430 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 RGS9BPQ6ZS82 235 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 ANKRD37Q7Z713 158 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 ZNF329Q86UD4 541 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 VASH2Q86V25 355 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 ABHD12Q8N2K0 398 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 ZSCAN4Q8NAM6 433 aaPredicted RBP2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 OR4F17Q8NGA8 305 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 FLVCR1-AS1Q8TAF5 88 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 RAET1EQ8TD07 263 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 C7orf34Q96L11 122 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 ZNF597Q96LX8 424 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 CASD1Q96PB1 797 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 OR4F4Q96R69 305 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 IWS1Q96ST2 819 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 KRTAP1-5Q9BYS1 174 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 TRIM15Q9C019 465 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 TMEM117Q9H0C3 514 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 LRRC40Q9H9A6 602 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 EXOSC3Q9NQT5 275 aaKnown RBP2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 FAM120CQ9NX05 1096 aaKnown RBP2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 MRPL39Q9NYK5 338 aaKnown RBP2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 RNF14Q9UBS8 474 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 GSTK1Q9Y2Q3 226 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 RNF115Q9Y4L5 304 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 KLF2Q9Y5W3 355 aaPredicted RBP2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 USP6P35125 1406 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 ATP10DQ9P241 1426 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 CNTNAP2Q9UHC6 1331 aa2.39□□□□□ -2.03
TRAJ40-201ENST00000390497 KDRP35968 1356 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 PNPLA6Q8IY17 1366 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 IGHV3OR16-12A0A075B7B8 117 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 A0A0J9YWU9 116 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 TRABD2BA6NFA1 517 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 SMCHD1A6NHR9 2005 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 LRRC30A6NM36 301 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 NPIPA7E9PJI5 369 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 K7EQM0 130 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 XPO1O14980 1071 aaKnown RBP2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 CTAGE5O15320 804 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 RIPK2O43353 540 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 OR1F1O43749 312 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 DUX1O43812 170 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 LCMT2O60294 686 aaKnown RBP2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 TPST2O60704 377 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 ZG16O60844 167 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 STX11O75558 287 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 PRAMEF12O95522 483 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 SEMA4FO95754 770 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 HCKP08631 526 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 IGFBP1P08833 259 aaPredicted RBP2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 NPIPA8P0DM63 369 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 ZNF10P21506 573 aaPredicted RBP2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 VEGFCP49767 419 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 RPS6P62753 249 aaKnown RBP2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 MS4A2Q01362 244 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 BDH1Q02338 343 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 PAX8Q06710 450 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 GPM6BQ13491 265 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 PTCH1Q13635 1447 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 ATXN7L3Q14CW9 347 aaPredicted RBP2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 CCL14Q16627 93 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 PCK2Q16822 640 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 CYP51A1Q16850 503 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 TMEM44Q2T9K0 475 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 C14orf28Q4W4Y0 310 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 MS4A13Q5J8X5 152 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 ZNF506Q5JVG8 444 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 MEDAGQ5VYS4 303 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 SLX4IPQ5VYV7 408 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 FAM219BQ5XKK7 198 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 CASC1Q6TDU7 716 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 SYT10Q6XYQ8 523 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 HACD2Q6Y1H2 254 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 STAC2Q6ZMT1 411 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 GRAMD2AQ8IUY3 354 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 ZNF440Q8IYI8 595 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 SYT14Q8NB59 555 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 OR52M1Q8NGK5 317 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 FNDC8Q8TC99 324 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 PNPT1Q8TCS8 783 aaKnown RBP2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 MIPOL1Q8TD10 442 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 TBCKQ8TEA7 893 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 AENQ8WTP8 325 aaKnown RBP2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 CRYGNQ8WXF5 182 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms