RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 GIMAP4Q9NUV9 329 aa16.14■□□□□ 0.17
UBE3D-203ENST00000369747 SEC14L3Q9UDX4 400 aa16.14■□□□□ 0.17
UBE3D-203ENST00000369747 FAM227AF5H4B4 570 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 H3BMQ9 156 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 WBP4O75554 376 aaKnown RBP16.13■□□□□ 0.17
UBE3D-203ENST00000369747 CDK4P11802 303 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 FGF5P12034 268 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 CBLP22681 906 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 ETV5P41161 510 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 MC3RP41968 323 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 SLC35A2P78381 396 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 TNFRSF17Q02223 184 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 TUBA3CQ13748 450 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 SMN1Q16637 294 aaKnown RBP16.13■□□□□ 0.17
UBE3D-203ENST00000369747 CA13Q8N1Q1 262 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 PHF10Q8WUB8 498 aaKnown RBP16.13■□□□□ 0.17
UBE3D-203ENST00000369747 APH1BQ8WW43 257 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 RASSF5Q8WWW0 418 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 C16orf58Q96GQ5 468 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 COG8Q96MW5 612 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 DEPDC7Q96QD5 511 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 RASSF1Q9NS23 344 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 CDV3Q9UKY7 258 aaKnown RBP16.13■□□□□ 0.17
UBE3D-203ENST00000369747 ZNF780BQ9Y6R6 833 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 EMC8O43402 210 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 CHST10O43529 356 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 SERPINB7O75635 380 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 CCNB2O95067 398 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 CHRM4P08173 479 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 PPP2R1BP30154 601 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 GGT2P36268 569 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 SHC2P98077 582 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 RHBDD2Q6NTF9 364 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 TCTN3Q6NUS6 607 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 COMTD1Q86VU5 262 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 RBM45Q8IUH3 476 aaKnown RBP16.13■□□□□ 0.17
UBE3D-203ENST00000369747 MUL1Q969V5 352 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 ELP4Q96EB1 424 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 LIN37Q96GY3 246 aaPredicted RBP16.13■□□□□ 0.17
UBE3D-203ENST00000369747 ALPK1Q96QP1 1244 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 SLC7A5P2Q9GIP4 190 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 BCL2L10Q9HD36 194 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 SLC39A1Q9NY26 324 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 AKAP7Q9P0M2 348 aaPredicted RBP16.13■□□□□ 0.17
UBE3D-203ENST00000369747 ERVK-18Q9QC07 812 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 RNF6Q9Y252 685 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 TPRKBQ9Y3C4 175 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 SNX5Q9Y5X3 404 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 KCNE3Q9Y6H6 103 aa16.13■□□□□ 0.17
UBE3D-203ENST00000369747 A0A1B0GX78 115 aa16.12■□□□□ 0.17
UBE3D-203ENST00000369747 ARRDC5A6NEK1 342 aa16.12■□□□□ 0.17
UBE3D-203ENST00000369747 DSCR3O14972 297 aa16.12■□□□□ 0.17
UBE3D-203ENST00000369747 ATE1O95260 518 aa16.12■□□□□ 0.17
UBE3D-203ENST00000369747 ZNF28P17035 718 aa16.12■□□□□ 0.17
UBE3D-203ENST00000369747 CPN2P22792 545 aa16.12■□□□□ 0.17
UBE3D-203ENST00000369747 KRT20P35900 424 aa16.12■□□□□ 0.17
UBE3D-203ENST00000369747 BUD31P41223 144 aaPredicted RBP16.12■□□□□ 0.17
UBE3D-203ENST00000369747 AVPR1BP47901 424 aa16.12■□□□□ 0.17
UBE3D-203ENST00000369747 ANXA11P50995 505 aaKnown RBP16.12■□□□□ 0.17
UBE3D-203ENST00000369747 CRISP3P54108 245 aa16.12■□□□□ 0.17
UBE3D-203ENST00000369747 PRR5P85299 388 aa16.12■□□□□ 0.17
UBE3D-203ENST00000369747 TARDBPQ13148 414 aaKnown RBP eCLIP16.12■□□□□ 0.178e-6■□□□□ 10.7
UBE3D-203ENST00000369747 LTB4RQ15722 352 aa16.12■□□□□ 0.17
UBE3D-203ENST00000369747 COLEC12Q5KU26 742 aa16.12■□□□□ 0.17
UBE3D-203ENST00000369747 ZNF770Q6IQ21 691 aaPredicted RBP16.12■□□□□ 0.17
UBE3D-203ENST00000369747 LACC1Q8IV20 430 aa16.12■□□□□ 0.17
UBE3D-203ENST00000369747 TMEM52Q8NDY8 209 aa16.12■□□□□ 0.17
UBE3D-203ENST00000369747 NUP43Q8NFH3 380 aa16.12■□□□□ 0.17
UBE3D-203ENST00000369747 VANGL1Q8TAA9 524 aaPredicted RBP16.12■□□□□ 0.17
UBE3D-203ENST00000369747 BBS10Q8TAM1 723 aa16.12■□□□□ 0.17
UBE3D-203ENST00000369747 RHNO1Q9BSD3 238 aa16.12■□□□□ 0.17
UBE3D-203ENST00000369747 RBCK1Q9BYM8 510 aa16.12■□□□□ 0.17
UBE3D-203ENST00000369747 ANKRA2Q9H9E1 313 aa16.12■□□□□ 0.17
UBE3D-203ENST00000369747 LYRM4Q9HD34 91 aa16.12■□□□□ 0.17
UBE3D-203ENST00000369747 PHF11Q9UIL8 331 aa16.12■□□□□ 0.17
UBE3D-203ENST00000369747 PSME2Q9UL46 239 aa16.12■□□□□ 0.17
UBE3D-203ENST00000369747 SRPK3Q9UPE1 567 aa16.12■□□□□ 0.17
UBE3D-203ENST00000369747 PCDHGB1Q9Y5G3 927 aa16.12■□□□□ 0.17
UBE3D-203ENST00000369747 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 TRBV4-1A0A0J9YWV2 114 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 TRIM64BA6NI03 449 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 B4E171 279 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 H0YIG0 161 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 TMX2-CTNND1H3BSU7 103 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 CYR61O00622 381 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 TSPAN7P41732 249 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 GSSP48637 474 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 MAN2A2P49641 1150 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 MAPK10P53779 464 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 SKP1P63208 163 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 KRT73Q86Y46 540 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 KAT2AQ92830 837 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 CLIP3Q96DZ5 547 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 MVB12AQ96EY5 273 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 GIMAP5Q96F15 307 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 PEX11GQ96HA9 241 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 DHRS1Q96LJ7 313 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 CCDC90BQ9GZT6 254 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 NMNAT1Q9HAN9 279 aaPredicted RBP16.11■□□□□ 0.17
UBE3D-203ENST00000369747 SCN3BQ9NY72 215 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms