RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 RBM48Q5RL73 367 aaKnown RBP13.93□□□□□ -0.18
NEK2-201ENST00000366998 YOD1Q5VVQ6 348 aaPredicted RBP13.93□□□□□ -0.18
NEK2-201ENST00000366998 ZNF836Q6ZNA1 936 aa13.93□□□□□ -0.18
NEK2-201ENST00000366998 CLIP4Q8N3C7 705 aa13.93□□□□□ -0.18
NEK2-201ENST00000366998 HDAC2Q92769 488 aaKnown RBP13.93□□□□□ -0.18
NEK2-201ENST00000366998 FAM192AQ9GZU8 254 aa13.93□□□□□ -0.18
NEK2-201ENST00000366998 NDRG4Q9ULP0 352 aaKnown RBP13.93□□□□□ -0.18
NEK2-201ENST00000366998 FER1L5A0AVI2 2057 aa13.93□□□□□ -0.18
NEK2-201ENST00000366998 IGHV5-10-1A0A0J9YXX1 117 aa13.92□□□□□ -0.18
NEK2-201ENST00000366998 CENPVL1A0A0U1RR11 272 aa13.92□□□□□ -0.18
NEK2-201ENST00000366998 CLDN24A6NM45 220 aa13.92□□□□□ -0.18
NEK2-201ENST00000366998 CPSF4LA6NMK7 179 aaKnown RBP13.92□□□□□ -0.18
NEK2-201ENST00000366998 KIAA0513O60268 411 aa13.92□□□□□ -0.18
NEK2-201ENST00000366998 OXSR1O95747 527 aaPredicted RBP13.92□□□□□ -0.18
NEK2-201ENST00000366998 GASTP01350 101 aa13.92□□□□□ -0.18
NEK2-201ENST00000366998 ANKRD34CP0C6C1 535 aa13.92□□□□□ -0.18
NEK2-201ENST00000366998 CCNYL3P0C7X3 344 aa13.92□□□□□ -0.18
NEK2-201ENST00000366998 TUBA4AP68366 448 aa13.92□□□□□ -0.18
NEK2-201ENST00000366998 BIKQ13323 160 aa13.92□□□□□ -0.18
NEK2-201ENST00000366998 NADK2Q4G0N4 442 aa13.92□□□□□ -0.18
NEK2-201ENST00000366998 C6orf141Q5SZD1 244 aa13.92□□□□□ -0.18
NEK2-201ENST00000366998 FOXB2Q5VYV0 432 aa13.92□□□□□ -0.18
NEK2-201ENST00000366998 TSPYL5Q86VY4 417 aaPredicted RBP13.92□□□□□ -0.18
NEK2-201ENST00000366998 PRSS58Q8IYP2 241 aa13.92□□□□□ -0.18
NEK2-201ENST00000366998 CNIH3Q8TBE1 160 aa13.92□□□□□ -0.18
NEK2-201ENST00000366998 TSLPQ969D9 159 aa13.92□□□□□ -0.18
NEK2-201ENST00000366998 CCDC74BQ96LY2 380 aa13.92□□□□□ -0.18
NEK2-201ENST00000366998 ZNF578Q96N58 590 aaPredicted RBP13.92□□□□□ -0.18
NEK2-201ENST00000366998 LMF2Q9BU23 707 aaKnown RBP13.92□□□□□ -0.18
NEK2-201ENST00000366998 PRR14Q9BWN1 585 aa13.92□□□□□ -0.18
NEK2-201ENST00000366998 CHST2Q9Y4C5 530 aa13.92□□□□□ -0.18
NEK2-201ENST00000366998 MUC3AQ02505 3323 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 VPS13AQ96RL7 3174 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 AGAP5A6NIR3 686 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 A8MUA0 341 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 C17orf105B2RV13 164 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 PEX12O00623 359 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 AP3D1O14617 1153 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 SOX30O94993 753 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 KCNK2O95069 426 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 DBIP07108 87 aaKnown RBP13.91□□□□□ -0.18
NEK2-201ENST00000366998 THBS1P07996 1170 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 AGXTP21549 392 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 RNF144AP50876 292 aaPredicted RBP13.91□□□□□ -0.18
NEK2-201ENST00000366998 UGT2B15P54855 530 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 HOXC5Q00444 222 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 PSG6Q00889 435 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 ANGPT1Q15389 498 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 MAPK14Q16539 360 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 Q6ZPB1 254 aaPredicted RBP13.91□□□□□ -0.18
NEK2-201ENST00000366998 ARHGAP22Q7Z5H3 698 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 ZBTB44Q8NCP5 570 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 SLC7A13Q8TCU3 470 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 HOXB13Q92826 284 aaPredicted RBP13.91□□□□□ -0.18
NEK2-201ENST00000366998 VSTM2LQ96N03 204 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 OR6C1Q96RD1 312 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 PITX2Q99697 317 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 SAP130Q9H0E3 1048 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 OR10A5Q9H207 317 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 TUBA8Q9NY65 449 aaPredicted RBP13.91□□□□□ -0.18
NEK2-201ENST00000366998 SRPK3Q9UPE1 567 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 DTX4Q9Y2E6 619 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 A0A1W2PRQ8 180 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 BRINP1O60477 761 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 CKMT1AP12532 417 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 IFNA8P32881 189 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 HLCSP50747 726 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 DUSP3P51452 185 aaPredicted RBP13.91□□□□□ -0.18
NEK2-201ENST00000366998 CDK5R2Q13319 367 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 TOP3AQ13472 1001 aaPredicted RBP13.91□□□□□ -0.18
NEK2-201ENST00000366998 DGCR6Q14129 220 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 NNATQ16517 81 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 ZNF528Q3MIS6 628 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 FLYWCH1Q4VC44 716 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 VWA2Q5GFL6 755 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 PHF19Q5T6S3 580 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 ZNF770Q6IQ21 691 aaPredicted RBP13.91□□□□□ -0.18
NEK2-201ENST00000366998 PODNL1Q6PEZ8 512 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 QSOX2Q6ZRP7 698 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 PLEKHM3Q6ZWE6 761 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 C16orf52Q8NHV5 167 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 NR4A3Q92570 626 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 CLIP3Q96DZ5 547 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 HRASLS5Q96KN8 279 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 GFM1Q96RP9 751 aaKnown RBP13.91□□□□□ -0.18
NEK2-201ENST00000366998 MCHR1Q99705 422 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 POLE3Q9NRF9 147 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 ENOPH1Q9UHY7 261 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 BLOC1S6Q9UL45 172 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 MGAT4BQ9UQ53 548 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 HSPE1-MOB4S4R3N1 261 aa13.91□□□□□ -0.18
NEK2-201ENST00000366998 SH3PXD2BA1X283 911 aa13.9□□□□□ -0.18
NEK2-201ENST00000366998 TRIM64A6NGJ6 449 aa13.9□□□□□ -0.18
NEK2-201ENST00000366998 DYRK3O43781 588 aa13.9□□□□□ -0.18
NEK2-201ENST00000366998 ANGPTL1O95841 491 aa13.9□□□□□ -0.18
NEK2-201ENST00000366998 ADAP00813 363 aa13.9□□□□□ -0.18
NEK2-201ENST00000366998 RPS4Y1P22090 263 aaKnown RBP13.9□□□□□ -0.18
NEK2-201ENST00000366998 CRHBPP24387 322 aa13.9□□□□□ -0.18
NEK2-201ENST00000366998 GALNSP34059 522 aa13.9□□□□□ -0.18
NEK2-201ENST00000366998 NUP107P57740 925 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms