RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 HSPBAP1Q96EW2 488 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 COL21A1Q96P44 957 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 G6PC3Q9BUM1 346 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 EFHD1Q9BUP0 239 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 SPATA5L1Q9BVQ7 753 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 UGT2B28Q9BY64 529 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 MAGIXQ9H6Y5 334 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 CCM2LQ9NUG4 571 aaPredicted RBP9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 FBXL4Q9UKA2 621 aa9.48□□□□□ -0.89
VIPAS39-201ENST00000327028 PCSK5Q92824 1860 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 H3BNX3 289 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 SUV39H1O43463 412 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 PRKNO60260 465 aaPredicted RBP9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 SERPINB7O75635 380 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 ZFAND5O76080 213 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 PRKD3O94806 890 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 MFN2O95140 757 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 IGKV1D-16P01601 117 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 OPN1SWP03999 348 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 LIFP15018 202 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 HOXB6P17509 224 aaKnown RBP9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 TGIF1Q15583 401 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 FIGNL1Q6PIW4 674 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 ARMC8Q8IUR7 673 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 BCORP1Q8N888 145 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 OR5L2Q8NGL0 311 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 SLCO4A1Q96BD0 722 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 FAM122AQ96E09 287 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 PYURFQ96I23 114 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 IP6K3Q96PC2 410 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 ZNF160Q9HCG1 818 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 P4HTMQ9NXG6 502 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 V9GYQ6 96 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 TMEM229AB2RXF0 380 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 FCMRO60667 390 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 ATP6V1G2O95670 118 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 ALPPP05187 535 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 CD247P20963 164 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 ATP6V1C1P21283 382 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 AP2B1P63010 937 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 DECR1Q16698 335 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 FAM98BQ52LJ0 330 aaKnown RBP9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 AMER2Q8N7J2 671 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 PAPD5Q8NDF8 572 aaKnown RBP9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 RASSF5Q8WWW0 418 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 LZICQ8WZA0 190 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 SLC47A1Q96FL8 570 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 HSH2DQ96JZ2 352 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 SCNM1Q9BWG6 230 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 TRIM45Q9H8W5 580 aaPredicted RBP9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 MTHFD2LQ9H903 347 aaPredicted RBP9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 ARMC1Q9NVT9 282 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 FBXO34Q9NWN3 711 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 MRTO4Q9UKD2 239 aaKnown RBP9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 MKLN1Q9UL63 735 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 AURKCQ9UQB9 309 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 PCDHGA10Q9Y5H3 936 aa9.47□□□□□ -0.89
VIPAS39-201ENST00000327028 IL33O95760 270 aa9.46□□□□□ -0.89
VIPAS39-201ENST00000327028 SEMG1P04279 462 aa9.46□□□□□ -0.89
VIPAS39-201ENST00000327028 RPS4Y1P22090 263 aaKnown RBP9.46□□□□□ -0.89
VIPAS39-201ENST00000327028 PLA2G5P39877 138 aa9.46□□□□□ -0.89
VIPAS39-201ENST00000327028 NR0B1P51843 470 aaKnown RBP9.46□□□□□ -0.89
VIPAS39-201ENST00000327028 SELENOWP63302 87 aa9.46□□□□□ -0.89
VIPAS39-201ENST00000327028 ATP1A4Q13733 1029 aa9.46□□□□□ -0.89
VIPAS39-201ENST00000327028 RCN1Q15293 331 aa9.46□□□□□ -0.89
VIPAS39-201ENST00000327028 ZAR1Q86SH2 424 aa9.46□□□□□ -0.89
VIPAS39-201ENST00000327028 SLC34A3Q8N130 599 aa9.46□□□□□ -0.89
VIPAS39-201ENST00000327028 SPPL2AQ8TCT8 520 aa9.46□□□□□ -0.89
VIPAS39-201ENST00000327028 SEPHS2Q99611 448 aa9.46□□□□□ -0.89
VIPAS39-201ENST00000327028 DOHHQ9BU89 302 aa9.46□□□□□ -0.89
VIPAS39-201ENST00000327028 DEFB126Q9BYW3 111 aa9.46□□□□□ -0.89
VIPAS39-201ENST00000327028 DCLRE1BQ9H816 532 aa9.46□□□□□ -0.89
VIPAS39-201ENST00000327028 CACYBPQ9HB71 228 aaKnown RBP9.46□□□□□ -0.89
VIPAS39-201ENST00000327028 SEC14L3Q9UDX4 400 aa9.46□□□□□ -0.89
VIPAS39-201ENST00000327028 AP4S1Q9Y587 144 aa9.46□□□□□ -0.89
VIPAS39-201ENST00000327028 SPTBN4Q9H254 2564 aa9.46□□□□□ -0.89
VIPAS39-201ENST00000327028 SPTBN2O15020 2390 aa9.46□□□□□ -0.9
VIPAS39-201ENST00000327028 EXPH5Q8NEV8 1989 aa9.46□□□□□ -0.9
VIPAS39-201ENST00000327028 TMEM200CA6NKL6 621 aa9.46□□□□□ -0.9
VIPAS39-201ENST00000327028 PEX12O00623 359 aa9.46□□□□□ -0.9
VIPAS39-201ENST00000327028 PABPC4LP0CB38 370 aaKnown RBP9.46□□□□□ -0.9
VIPAS39-201ENST00000327028 RAP2AP10114 183 aa9.46□□□□□ -0.9
VIPAS39-201ENST00000327028 ICAM2P13598 275 aa9.46□□□□□ -0.9
VIPAS39-201ENST00000327028 SPINK2P20155 84 aa9.46□□□□□ -0.9
VIPAS39-201ENST00000327028 LCN1P31025 176 aa9.46□□□□□ -0.9
VIPAS39-201ENST00000327028 PSMD4P55036 377 aaKnown RBP9.46□□□□□ -0.9
VIPAS39-201ENST00000327028 CHRNB3Q05901 458 aa9.46□□□□□ -0.9
VIPAS39-201ENST00000327028 PLCXD2Q0VAA5 305 aa9.46□□□□□ -0.9
VIPAS39-201ENST00000327028 CLN3Q13286 438 aa9.46□□□□□ -0.9
VIPAS39-201ENST00000327028 GPR68Q15743 365 aa9.46□□□□□ -0.9
VIPAS39-201ENST00000327028 FLYWCH1Q4VC44 716 aa9.46□□□□□ -0.9
VIPAS39-201ENST00000327028 TBCELQ5QJ74 424 aa9.46□□□□□ -0.9
VIPAS39-201ENST00000327028 DHRS4L2Q6PKH6 230 aa9.46□□□□□ -0.9
VIPAS39-201ENST00000327028 VTCN1Q7Z7D3 282 aa9.46□□□□□ -0.9
VIPAS39-201ENST00000327028 VASH2Q86V25 355 aa9.46□□□□□ -0.9
VIPAS39-201ENST00000327028 PEX5LQ8IYB4 626 aa9.46□□□□□ -0.9
VIPAS39-201ENST00000327028 TMBIM1Q969X1 311 aa9.46□□□□□ -0.9
VIPAS39-201ENST00000327028 TPD52L3Q96J77 140 aa9.46□□□□□ -0.9
VIPAS39-201ENST00000327028 LMF1Q96S06 567 aa9.46□□□□□ -0.9
VIPAS39-201ENST00000327028 RNPEPL1Q9HAU8 725 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms