RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 FOXQ1Q9C009 403 aa11.13□□□□□ -0.63
DDR1-223ENST00000324771 TMEM9Q9P0T7 183 aa11.13□□□□□ -0.63
DDR1-223ENST00000324771 HTR3EA5X5Y0 456 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 SSNA1O43805 119 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 AKAP8O43823 692 aaKnown RBP11.12□□□□□ -0.63
DDR1-223ENST00000324771 PRAMEF4O60810 478 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 KHDRBS3O75525 346 aaKnown RBP11.12□□□□□ -0.63
DDR1-223ENST00000324771 SEMA3DO95025 777 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 SMIM18P0DKX4 95 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 FOSL2P15408 326 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 CHMP24386 653 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 EDNRAP25101 427 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 DLX2Q07687 328 aaPredicted RBP11.12□□□□□ -0.63
DDR1-223ENST00000324771 SPCS2Q15005 226 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 PROX2Q3B8N5 592 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 SOWAHCQ53LP3 525 aaPredicted RBP11.12□□□□□ -0.63
DDR1-223ENST00000324771 OR2G6Q5TZ20 316 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 PRAMEF9Q5VWM5 478 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 NAXEQ8NCW5 288 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 OR52R1Q8NGF1 315 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 OR52E2Q8NGJ4 325 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 SUN5Q8TC36 379 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 OSTF1Q92882 214 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 ZDHHC12Q96GR4 267 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 ADOQ96SZ5 270 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 MND1Q9BWT6 205 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 TAPBPLQ9BX59 468 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 OR52A5Q9H2C5 316 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 NECTIN3Q9NQS3 549 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 RABL2AQ9UBK7 228 aaPredicted RBP11.12□□□□□ -0.63
DDR1-223ENST00000324771 NTNG1Q9Y2I2 539 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 GMEB1Q9Y692 573 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 CCDC88CQ9P219 2028 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 JRKO75564 520 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 GIMD1P0DJR0 217 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 SDC2P34741 201 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 SLC36A4Q6YBV0 504 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 GPAT4Q86UL3 456 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 ZNF547Q8IVP9 402 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 ZNF420Q8TAQ5 688 aaPredicted RBP11.12□□□□□ -0.63
DDR1-223ENST00000324771 WDR20Q8TBZ3 569 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 GNPDA2Q8TDQ7 276 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 CITED4Q96RK1 184 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 TMEM185BQ9H7F4 350 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 VNN3Q9NY84 501 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 ARID2Q68CP9 1835 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 TRAV27A0A087WT01 109 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 A0A1W2PR48 441 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 NOTOA8MTQ0 251 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 RAD1O60671 282 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 CISD3P0C7P0 127 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 PSKH1P11801 424 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 OMPP47874 163 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 MTNR1AP48039 350 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 NR0B1P51843 470 aaKnown RBP11.12□□□□□ -0.63
DDR1-223ENST00000324771 SCN1BQ07699 218 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 TUBA3CQ13748 450 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 GXYLT1Q4G148 440 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 BCL7AQ4VC05 210 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 AGBL4Q5VU57 503 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 ABHD17CQ6PCB6 329 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 MSRB3Q8IXL7 192 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 OR2L8Q8NGY9 312 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 UCN3Q969E3 161 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 CRELD1Q96HD1 420 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 AMDHD1Q96NU7 426 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 TCEAL2Q9H3H9 227 aaPredicted RBP11.12□□□□□ -0.63
DDR1-223ENST00000324771 MTHFD2LQ9H903 347 aaPredicted RBP11.12□□□□□ -0.63
DDR1-223ENST00000324771 HCN2Q9UL51 889 aa11.12□□□□□ -0.63
DDR1-223ENST00000324771 LOC105369274A0A096LPK9 316 aa11.11□□□□□ -0.63
DDR1-223ENST00000324771 LOC102723532A0A0G2JNH3 316 aa11.11□□□□□ -0.63
DDR1-223ENST00000324771 NOS1APO75052 506 aaPredicted RBP11.11□□□□□ -0.63
DDR1-223ENST00000324771 ADAP00813 363 aa11.11□□□□□ -0.63
DDR1-223ENST00000324771 GSTT2P0CG29 244 aa11.11□□□□□ -0.63
DDR1-223ENST00000324771 GSTT2BP0CG30 244 aa11.11□□□□□ -0.63
DDR1-223ENST00000324771 CDK4P11802 303 aa11.11□□□□□ -0.63
DDR1-223ENST00000324771 KIR2DS3Q14952 304 aa11.11□□□□□ -0.63
DDR1-223ENST00000324771 TRMT12Q53H54 448 aaKnown RBP11.11□□□□□ -0.63
DDR1-223ENST00000324771 OR4N4Q8N0Y3 316 aa11.11□□□□□ -0.63
DDR1-223ENST00000324771 ATOH1Q92858 354 aaPredicted RBP11.11□□□□□ -0.63
DDR1-223ENST00000324771 GAL3ST3Q96A11 431 aa11.11□□□□□ -0.63
DDR1-223ENST00000324771 WACQ9BTA9 647 aa11.11□□□□□ -0.63
DDR1-223ENST00000324771 CENPOQ9BU64 300 aa11.11□□□□□ -0.63
DDR1-223ENST00000324771 MED20Q9H944 212 aa11.11□□□□□ -0.63
DDR1-223ENST00000324771 IFT52Q9Y366 437 aa11.11□□□□□ -0.63
DDR1-223ENST00000324771 IRGMA1A4Y4 181 aa11.11□□□□□ -0.63
DDR1-223ENST00000324771 LRIT2A6NDA9 550 aa11.11□□□□□ -0.63
DDR1-223ENST00000324771 GFRA2O00451 464 aa11.11□□□□□ -0.63
DDR1-223ENST00000324771 FCMRO60667 390 aa11.11□□□□□ -0.63
DDR1-223ENST00000324771 CD38P28907 300 aa11.11□□□□□ -0.63
DDR1-223ENST00000324771 SLC15A1P46059 708 aa11.11□□□□□ -0.63
DDR1-223ENST00000324771 ALG11Q2TAA5 492 aa11.11□□□□□ -0.63
DDR1-223ENST00000324771 ZNF691Q5VV52 312 aa11.11□□□□□ -0.63
DDR1-223ENST00000324771 C10orf111Q8N326 155 aa11.11□□□□□ -0.63
DDR1-223ENST00000324771 SDR16C5Q8N3Y7 309 aa11.11□□□□□ -0.63
DDR1-223ENST00000324771 TMEM156Q8N614 296 aa11.11□□□□□ -0.63
DDR1-223ENST00000324771 NRSN2Q9GZP1 204 aa11.11□□□□□ -0.63
DDR1-223ENST00000324771 CRISPLD2Q9H0B8 497 aa11.11□□□□□ -0.63
DDR1-223ENST00000324771 PMF1-BGLAPU3KQ54 211 aa11.11□□□□□ -0.63
DDR1-223ENST00000324771 A0A0G2JPF8 293 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms