RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 MED25Q71SY5 747 aa20.72■□□□□ 0.91
SMAD1-201ENST00000302085 GPR135Q8IZ08 494 aa20.72■□□□□ 0.91
SMAD1-201ENST00000302085 ZNF566Q969W8 418 aa20.72■□□□□ 0.91
SMAD1-201ENST00000302085 NDC1Q9BTX1 674 aa20.72■□□□□ 0.91
SMAD1-201ENST00000302085 KLHL28Q9NXS3 571 aa20.72■□□□□ 0.91
SMAD1-201ENST00000302085 MGAT4BQ9UQ53 548 aa20.72■□□□□ 0.91
SMAD1-201ENST00000302085 NPIPA5A0A0B4J1W7 369 aa20.71■□□□□ 0.91
SMAD1-201ENST00000302085 NPIPA7E9PJI5 369 aa20.71■□□□□ 0.91
SMAD1-201ENST00000302085 H3BSA7 217 aa20.71■□□□□ 0.91
SMAD1-201ENST00000302085 TOX3O15405 576 aaPredicted RBP20.71■□□□□ 0.91
SMAD1-201ENST00000302085 OR10H3O60404 316 aa20.71■□□□□ 0.91
SMAD1-201ENST00000302085 ANGPTL1O95841 491 aa20.71■□□□□ 0.91
SMAD1-201ENST00000302085 AK1P00568 194 aa20.71■□□□□ 0.91
SMAD1-201ENST00000302085 ADAP00813 363 aa20.71■□□□□ 0.91
SMAD1-201ENST00000302085 NPIPA8P0DM63 369 aa20.71■□□□□ 0.91
SMAD1-201ENST00000302085 TRHRP34981 398 aaPredicted RBP20.71■□□□□ 0.91
SMAD1-201ENST00000302085 NUP107P57740 925 aa20.71■□□□□ 0.91
SMAD1-201ENST00000302085 FUT7Q11130 342 aa20.71■□□□□ 0.91
SMAD1-201ENST00000302085 KCTD8Q6ZWB6 473 aa20.71■□□□□ 0.91
SMAD1-201ENST00000302085 NLGN4XQ8N0W4 816 aa20.71■□□□□ 0.91
SMAD1-201ENST00000302085 VSTM2LQ96N03 204 aa20.71■□□□□ 0.91
SMAD1-201ENST00000302085 YIPF3Q9GZM5 350 aa20.71■□□□□ 0.91
SMAD1-201ENST00000302085 RASSF1Q9NS23 344 aa20.71■□□□□ 0.91
SMAD1-201ENST00000302085 REV1Q9UBZ9 1251 aa20.71■□□□□ 0.91
SMAD1-201ENST00000302085 FBXO4Q9UKT5 387 aa20.71■□□□□ 0.91
SMAD1-201ENST00000302085 DTX4Q9Y2E6 619 aa20.71■□□□□ 0.91
SMAD1-201ENST00000302085 ZDBF2Q9HCK1 2354 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 YKT6O15498 198 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 XPNPEP2O43895 674 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 KIAA0513O60268 411 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 BRINP1O60477 761 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 KCNK2O95069 426 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 IFNA16P05015 189 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 THBS1P07996 1170 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 HTR1AP08908 422 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 CCDC159P0C7I6 412 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 GSSP48637 474 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 GABARAPL2P60520 117 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 PIGFQ07326 219 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 BORAQ6PGQ7 559 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 ZAR1Q86SH2 424 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 ENTHD1Q8IYW4 607 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 CNDP2Q96KP4 475 aaKnown RBP20.7■□□□□ 0.9
SMAD1-201ENST00000302085 PTCHD1Q96NR3 888 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 CNPPD1Q9BV87 410 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 UCK2Q9BZX2 261 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 CACYBPQ9HB71 228 aaKnown RBP20.7■□□□□ 0.9
SMAD1-201ENST00000302085 PAK1IP1Q9NWT1 392 aaPredicted RBP20.7■□□□□ 0.9
SMAD1-201ENST00000302085 CDC14AQ9UNH5 594 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 RNF6Q9Y252 685 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 NTNG1Q9Y2I2 539 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 CEPT1Q9Y6K0 416 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 PEX12O00623 359 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 WBP4O75554 376 aaKnown RBP20.7■□□□□ 0.9
SMAD1-201ENST00000302085 RPLP0P05388 317 aaKnown RBP20.7■□□□□ 0.9
SMAD1-201ENST00000302085 DBIP07108 87 aaKnown RBP20.7■□□□□ 0.9
SMAD1-201ENST00000302085 GALNSP34059 522 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 PGDP52209 483 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 LSM11P83369 360 aaKnown RBP eCLIP20.7■□□□□ 0.9
SMAD1-201ENST00000302085 SERTAD2Q14140 314 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 BROXQ5VW32 411 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 MORN4Q8NDC4 146 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 OR4N2Q8NGD1 307 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 APH1BQ8WW43 257 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 OR1F2PQ96R84 312 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 DGCR6LQ9BY27 220 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 POLE3Q9NRF9 147 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 SEMA4GQ9NTN9 838 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 GMEB2Q9UKD1 530 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 BLOC1S6Q9UL45 172 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 ERVK-19Q9WJR5 959 aa20.7■□□□□ 0.9
SMAD1-201ENST00000302085 LAMA1P25391 3075 aa20.69■□□□□ 0.9
SMAD1-201ENST00000302085 CPSF4LA6NMK7 179 aaKnown RBP20.69■□□□□ 0.9
SMAD1-201ENST00000302085 PTGES3LE9PB15 166 aa20.69■□□□□ 0.9
SMAD1-201ENST00000302085 DSCR3O14972 297 aa20.69■□□□□ 0.9
SMAD1-201ENST00000302085 SOX30O94993 753 aa20.69■□□□□ 0.9
SMAD1-201ENST00000302085 CCNYL3P0C7X3 344 aa20.69■□□□□ 0.9
SMAD1-201ENST00000302085 CRISP1P54107 249 aa20.69■□□□□ 0.9
SMAD1-201ENST00000302085 RGS8P57771 180 aaPredicted RBP20.69■□□□□ 0.9
SMAD1-201ENST00000302085 TAS2R41P59536 307 aa20.69■□□□□ 0.9
SMAD1-201ENST00000302085 CXCR4P61073 352 aa20.69■□□□□ 0.9
SMAD1-201ENST00000302085 PMS2P3Q13401 168 aa20.69■□□□□ 0.9
SMAD1-201ENST00000302085 DSG2Q14126 1118 aa20.69■□□□□ 0.9
SMAD1-201ENST00000302085 SMN1Q16637 294 aaKnown RBP20.69■□□□□ 0.9
SMAD1-201ENST00000302085 ARHGAP22Q7Z5H3 698 aa20.69■□□□□ 0.9
SMAD1-201ENST00000302085 NR4A3Q92570 626 aa20.69■□□□□ 0.9
SMAD1-201ENST00000302085 DIO2Q92813 273 aa20.69■□□□□ 0.9
SMAD1-201ENST00000302085 PMM1Q92871 262 aa20.69■□□□□ 0.9
SMAD1-201ENST00000302085 POLR1BQ9H9Y6 1135 aa20.69■□□□□ 0.9
SMAD1-201ENST00000302085 ZNF304Q9HCX3 659 aa20.69■□□□□ 0.9
SMAD1-201ENST00000302085 FTSJ1Q9UET6 329 aa20.69■□□□□ 0.9
SMAD1-201ENST00000302085 MMACHCQ9Y4U1 282 aa20.69■□□□□ 0.9
SMAD1-201ENST00000302085 ABCB7O75027 752 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 CYP7B1O75881 506 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 CPNE6O95741 557 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 IGKV1D-16P01601 117 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 CLPSP04118 112 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 TNNI3P19429 210 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 CHMP24386 653 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 HOXD12P35452 270 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms