RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 PRMT1Q99873 361 aaKnown RBP4.05□□□□□ -1.76
TRA2B-201ENST00000259043 DDX50Q9BQ39 737 aaKnown RBP4.05□□□□□ -1.76
TRA2B-201ENST00000259043 CCDC3Q9BQI4 270 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 ALKBH7Q9BT30 221 aaPredicted RBP4.05□□□□□ -1.76
TRA2B-201ENST00000259043 DCTN5Q9BTE1 182 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 FUCA2Q9BTY2 467 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 TEKT3Q9BXF9 490 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 CLEC7AQ9BXN2 247 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 TMEM245Q9H330 911 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 HPS4Q9NQG7 708 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 SMC3Q9UQE7 1217 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 TEX264Q9Y6I9 313 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 NOTCH2Q04721 2471 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 BOD1L1Q8NFC6 3051 aa4.05□□□□□ -1.76
TRA2B-201ENST00000259043 TMEM129A0AVI4 362 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 ESYT2A0FGR8 921 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 MEX3AA1L020 520 aaKnown RBP4.04□□□□□ -1.76
TRA2B-201ENST00000259043 E5RGE8 158 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 TRDMT1O14717 391 aaKnown RBP4.04□□□□□ -1.76
TRA2B-201ENST00000259043 GLRA3O75311 464 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 CLN5O75503 358 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 CDK2AP2O75956 126 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 PRAMEF12O95522 483 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 TDP2O95551 362 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 CLDN1O95832 211 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 CD59P13987 128 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 DESP17661 470 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 AHCYP23526 432 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 SMSP52788 366 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 PSMC5P62195 406 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 GALK2Q01415 458 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 TWF1Q12792 350 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 ELAVL2Q12926 359 aaKnown RBP4.04□□□□□ -1.76
TRA2B-201ENST00000259043 PPP1R8Q12972 351 aaKnown RBP4.04□□□□□ -1.76
TRA2B-201ENST00000259043 GAMTQ14353 236 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 NECTIN1Q15223 517 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 UPP1Q16831 310 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 NEK5Q6P3R8 708 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 SIGLEC15Q6ZMC9 328 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 MACC1Q6ZN28 852 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 Q6ZRP5 223 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 KRTAP5-2Q701N4 177 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 ADCK1Q86TW2 530 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 MARCH9Q86YJ5 346 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 LAX1Q8IWV1 398 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 KIRREL3Q8IZU9 778 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 LYG1Q8N1E2 194 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 KLHDC1Q8N7A1 406 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 GBP7Q8N8V2 638 aaPredicted RBP4.04□□□□□ -1.76
TRA2B-201ENST00000259043 LEMD2Q8NC56 503 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 OR7A2PQ8NGA2 310 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 OR4C15Q8NGM1 316 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 KIAA1524Q8TCG1 905 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 RNASE8Q8TDE3 154 aaKnown RBP4.04□□□□□ -1.76
TRA2B-201ENST00000259043 PIK3R3Q92569 461 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 PRCCQ92733 491 aaPredicted RBP4.04□□□□□ -1.76
TRA2B-201ENST00000259043 GGHQ92820 318 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 AZIN2Q96A70 460 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 JPH2Q9BR39 696 aaPredicted RBP4.04□□□□□ -1.76
TRA2B-201ENST00000259043 TRIM51Q9BSJ1 452 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 TRIM6Q9C030 488 aaPredicted RBP4.04□□□□□ -1.76
TRA2B-201ENST00000259043 SLC39A8Q9C0K1 460 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 DDX47Q9H0S4 455 aaKnown RBP4.04□□□□□ -1.76
TRA2B-201ENST00000259043 GLT8D2Q9H1C3 349 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 SYTL2Q9HCH5 934 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 ZCCHC3Q9NUD5 404 aaKnown RBP4.04□□□□□ -1.76
TRA2B-201ENST00000259043 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.04□□□□□ -1.76
TRA2B-201ENST00000259043 UBQLN2Q9UHD9 624 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 KCNK6Q9Y257 313 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 NSG2Q9Y328 171 aa4.04□□□□□ -1.76
TRA2B-201ENST00000259043 UTP20O75691 2785 aaKnown RBP4.04□□□□□ -1.76
TRA2B-201ENST00000259043 COL5A1P20908 1838 aaPredicted RBP4.04□□□□□ -1.76
TRA2B-201ENST00000259043 TRBV5-5A0A0J9YX44 114 aa4.03□□□□□ -1.76
TRA2B-201ENST00000259043 ARHGAP42A6NI28 874 aa4.03□□□□□ -1.76
TRA2B-201ENST00000259043 J3QKU1 62 aa4.03□□□□□ -1.76
TRA2B-201ENST00000259043 PRRG1O14668 218 aa4.03□□□□□ -1.76
TRA2B-201ENST00000259043 TXNL1O43396 289 aa4.03□□□□□ -1.76
TRA2B-201ENST00000259043 SLC37A4O43826 429 aa4.03□□□□□ -1.76
TRA2B-201ENST00000259043 SSX5O60225 188 aa4.03□□□□□ -1.76
TRA2B-201ENST00000259043 B3GAT3O94766 335 aa4.03□□□□□ -1.76
TRA2B-201ENST00000259043 APBB3O95704 486 aa4.03□□□□□ -1.76
TRA2B-201ENST00000259043 AREGP15514 252 aa4.03□□□□□ -1.76
TRA2B-201ENST00000259043 GOT1P17174 413 aa4.03□□□□□ -1.76
TRA2B-201ENST00000259043 GLRA2P23416 452 aa4.03□□□□□ -1.76
TRA2B-201ENST00000259043 U2AF2P26368 475 aaKnown RBP eCLIP4.03□□□□□ -1.761e-6■□□□□ 8.4
TRA2B-201ENST00000259043 ARL2P36404 184 aa4.03□□□□□ -1.76
TRA2B-201ENST00000259043 PTGER3P43115 390 aa4.03□□□□□ -1.76
TRA2B-201ENST00000259043 DNA2P51530 1060 aa4.03□□□□□ -1.76
TRA2B-201ENST00000259043 ATXN3P54252 364 aaPredicted RBP4.03□□□□□ -1.76
TRA2B-201ENST00000259043 SGCGQ13326 291 aa4.03□□□□□ -1.76
TRA2B-201ENST00000259043 DMC1Q14565 340 aa4.03□□□□□ -1.76
TRA2B-201ENST00000259043 EMC2Q15006 297 aa4.03□□□□□ -1.76
TRA2B-201ENST00000259043 GPR33Q49SQ1 333 aa4.03□□□□□ -1.76
TRA2B-201ENST00000259043 CCDC40Q4G0X9 1142 aa4.03□□□□□ -1.76
TRA2B-201ENST00000259043 ZNF542PQ5EBM4 170 aa4.03□□□□□ -1.76
TRA2B-201ENST00000259043 SLC25A53Q5H9E4 307 aa4.03□□□□□ -1.76
TRA2B-201ENST00000259043 LCE3AQ5TA76 89 aa4.03□□□□□ -1.76
TRA2B-201ENST00000259043 UGT3A1Q6NUS8 523 aa4.03□□□□□ -1.76
TRA2B-201ENST00000259043 TRIM65Q6PJ69 517 aa4.03□□□□□ -1.76
TRA2B-201ENST00000259043 MFSD7Q6UXD7 560 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms