RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Znf592Q8BHZ4 1262 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Vps37aQ8CHS8 397 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Camkk1Q8VBY2 505 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 NclnQ8VCM8 563 aaKnown RBP15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Olfr1048Q8VGS2 320 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Olfr1019Q8VGS3 310 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Cyp2j9Q924D1 502 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 ArskQ9D2L1 553 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Tex19.2Q9D5S1 317 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Acss2Q9QXG4 701 aa15.9■□□□□ 0.14
Ctcf-201ENSMUST00000005841 Cd101A8E0Y8 1033 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Gm5483B2RV77 97 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Gsg1lD3Z7H4 322 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Zfp169E9Q3R6 731 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Cd1d1P11609 336 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Cd1d2P11610 336 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 FshrP35378 692 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Plin2P43883 425 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Arpp19P56212 112 aaKnown RBP15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 FcrlbQ5DRQ8 427 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Laptm5Q61168 261 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Kiaa1671Q8BRV5 308 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Pphln1Q8K2H1 381 aaKnown RBP15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Vmn1r200Q8R281 312 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Zswim7Q9CWQ2 152 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Rnf181Q9CY62 165 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Vsig1Q9D2J4 407 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Tprg1lQ9DBS2 266 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Tnfrsf21Q9EPU5 655 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 RhoaQ9QUI0 193 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Padi1Q9Z185 662 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Olfr549E9Q542 316 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Csf2P01587 141 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 AhrP30561 848 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 TesP47226 423 aaKnown RBP15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 HpQ61646 347 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Spag1Q80ZX8 901 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Fbxl22Q8C7B6 236 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Irf2bp1Q8R3Y8 584 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Olfr1261Q8VFB0 306 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Trmt5Q9D0C4 501 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Prr14lE9Q7C4 1971 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Gm44973A0A140LJJ1 189 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Olfr1034A0A1L1ST14 310 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Olfr1056A2AVY0 313 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 L3mbtl4B1B1A0 621 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Vmn2r116E9Q6I0 856 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Atp1b2P14231 290 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 HepacamQ640R3 418 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 B430306N03RikQ6QX36 289 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Olfr1161Q7TR29 321 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Ppp1r15bQ8BFW3 697 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Steap2Q8BWB6 489 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Piwil4Q8CGT6 848 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Cadm1Q8R5M8 456 aaKnown RBP15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Ndufs1Q91VD9 727 aaKnown RBP15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Znf524Q9D0B1 321 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Aldh7a1Q9DBF1 539 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Sorcs1Q9JLC4 1167 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Slc2a5Q9WV38 501 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Clec2iQ9WVF9 217 aa15.89■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Kcnn4O89109 425 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 TtkP35761 856 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 CskP41241 450 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Bglap3P54615 95 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Prss48Q14B25 312 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Traf4Q61382 470 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Ugt8Q64676 541 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Ffar4Q7TMA4 361 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Tgif2Q8C0Y1 237 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Olfr811Q8VFI1 319 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Rsph1Q8VIG3 301 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 NcdnQ9Z0E0 729 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Padi3Q9Z184 664 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Cxcr3O88410 367 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Pmp22P16646 161 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Sec1P97353 368 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Il12rb2P97378 874 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Sh2d1b2Q45HK4 132 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Osgepl1Q6PEB4 414 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Olfr594Q7TRR4 311 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Fam98bQ80VD1 429 aaKnown RBP15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Olfr1424Q8VFV1 313 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Ash2lQ91X20 623 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Carhsp1Q9CR86 148 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Ebna1bp2Q9D903 306 aaKnown RBP15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Myo10F8VQB6 2062 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Ppp1r3dA2AJW4 279 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 9230113P08RikD3YWX3 137 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 SpxD3Z752 116 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Cacng2O88602 323 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Zfp28P10078 825 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Sppl2bQ3TD49 578 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Sf1Q64213 653 aaKnown RBP15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Smarcd3Q6P9Z1 483 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Olfr26Q7TRB7 308 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Olfr374Q7TRY0 313 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 SelenoiQ80TA1 398 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Acsm4Q80W40 580 aa15.88■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Cst13Q80ZN5 141 aa15.88■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms