RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 RAB3BP20337 219 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 ACY1Q03154 408 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 FKBP10Q96AY3 582 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 DPH1Q9BZG8 443 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 EBF1Q9UH73 591 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 PRAMEF26H0Y7S4 382 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 FANCGO15287 622 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 GABBR2O75899 941 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 MYF6P23409 242 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 MAP4K2Q12851 820 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 RSU1Q15404 277 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 HNRNPA1L2Q32P51 320 aaKnown RBP12.13□□□□□ -0.47
SCN8A-209ENST00000627620 ABHD5Q8WTS1 349 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 NEIL2Q969S2 332 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 OR2S2Q9NQN1 319 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 BTNL2Q9UIR0 455 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 LRP6O75581 1613 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 IFNA2P01563 188 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 DDCP20711 480 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 SELENOWP63302 87 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 PIN1Q13526 163 aaPredicted RBP12.13□□□□□ -0.47
SCN8A-209ENST00000627620 CCDC58Q4VC31 144 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 FCRLBQ6BAA4 426 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 LIX1LQ8IVB5 337 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 PIANPQ8IYJ0 282 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 OR9Q2Q8NGE9 314 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 OR6Q1Q8NGQ2 317 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 MGAT4CQ9UBM8 478 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 BMP2P12643 396 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 PITPNBP48739 271 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 NTRK2Q16620 822 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 C6orf132Q5T0Z8 1188 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 KIAA0895LQ68EN5 471 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 C3orf58Q8NDZ4 430 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 OR6C4Q8NGE1 309 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 OR51L1Q8NGJ5 315 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 OR5AK2Q8NH90 309 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 RNF38Q9H0F5 515 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 GDE1Q9NZC3 331 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 C17orf105B2RV13 164 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 LILRB3O75022 631 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 NDUFB2O95178 105 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 RETP07949 1114 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 CFL1P23528 166 aaKnown RBP12.12□□□□□ -0.47
SCN8A-209ENST00000627620 NKX3-2P78367 333 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 DEFB133Q30KQ1 61 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 C6orf183Q5T699 404 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 PRSS48Q7RTY5 328 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 RADILQ96JH8 1075 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 RANBP3Q9H6Z4 567 aaPredicted RBP12.12□□□□□ -0.47
SCN8A-209ENST00000627620 ARMC1Q9NVT9 282 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 RIMS3Q9UJD0 308 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 ANTXRLA6NF34 631 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 GJE1A6NN92 205 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 RNASET2O00584 256 aaKnown RBP12.12□□□□□ -0.47
SCN8A-209ENST00000627620 FOXD2O60548 495 aaPredicted RBP12.12□□□□□ -0.47
SCN8A-209ENST00000627620 TOXO94900 526 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 PRLP01236 227 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 IFNA5P01569 189 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 CLDN2P57739 230 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 COL28A1Q2UY09 1125 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 TMEM205Q6UW68 189 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 TAS1R1Q7RTX1 841 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 FAM217AQ8IXS0 508 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 SYNPOQ8N3V7 929 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 DTWD1Q8N5C7 304 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 ANKK1Q8NFD2 765 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 OR4K3Q96R72 315 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 TXLNGYQ9BZA5 131 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 ACOT13Q9NPJ3 140 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 CNIH4Q9P003 139 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 HIF3AQ9Y2N7 669 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 ZNF175Q9Y473 711 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 A0A0J9YY10 115 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 SMCO3A2RU48 225 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 SGK494L7N484 410 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 RDH16O75452 317 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 TLE3Q04726 772 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 HMBOX1Q6NT76 420 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 ZNF619Q8N2I2 560 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 SORBS1Q9BX66 1292 aaKnown RBP12.12□□□□□ -0.47
SCN8A-209ENST00000627620 RDH14Q9HBH5 336 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 CD207Q9UJ71 328 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 ARFGEF2Q9Y6D5 1785 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 WASH4PA8MWX3 477 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 IRF2P14316 349 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 DNASE1P24855 282 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 ARL3P36405 182 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 STT3AP46977 705 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 PRPS1P60891 318 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 HTR3DQ70Z44 454 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 TRIM46Q7Z4K8 759 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 CPXM2Q8N436 756 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 GALNT6Q8NCL4 622 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 ISG20Q96AZ6 181 aaKnown RBP12.12□□□□□ -0.47
SCN8A-209ENST00000627620 PCDHGA6Q9Y5G7 932 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 PCDHA9Q9Y5H5 950 aa12.12□□□□□ -0.47
SCN8A-209ENST00000627620 FAM171A2A8MVW0 826 aa12.11□□□□□ -0.47
SCN8A-209ENST00000627620 WDR5P61964 334 aaKnown RBP12.11□□□□□ -0.47
SCN8A-209ENST00000627620 NCS1P62166 190 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms