RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 LINC01599Q8WXQ3 324 aa9.2□□□□□ -0.94
TNFRSF9-204ENST00000615230 SLC41A3Q96GZ6 507 aa9.2□□□□□ -0.94
TNFRSF9-204ENST00000615230 CENPOQ9BU64 300 aa9.2□□□□□ -0.94
TNFRSF9-204ENST00000615230 ECM29Q5VYK3 1845 aa9.2□□□□□ -0.94
TNFRSF9-204ENST00000615230 QSER1Q2KHR3 1735 aa9.2□□□□□ -0.94
TNFRSF9-204ENST00000615230 SHANK3Q9BYB0 1731 aa9.2□□□□□ -0.94
TNFRSF9-204ENST00000615230 ACOX3O15254 700 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 TNFSF14O43557 240 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 RPS17P08708 135 aaKnown RBP9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 POU2F1P14859 743 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 HERV-K104P61576 105 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 PYCR3Q53H96 274 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 SLC22A10Q63ZE4 541 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 PIGWQ7Z7B1 504 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 CBR4Q8N4T8 237 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 ZNF548Q8NEK5 533 aaPredicted RBP9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 MRGPRX1Q96LB2 322 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 TESQ9UGI8 421 aaKnown RBP9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 SPATA2Q9UM82 520 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 ERVK-19Q9WJR5 959 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 CDH10Q9Y6N8 788 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 LINC00854A0A1B0GVQ3 168 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 PLSCR5A0PG75 271 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 ZNF99A8MXY4 864 aaPredicted RBP9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 C11orf98E9PRG8 122 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 CTSCP53634 463 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 GPR18Q14330 331 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 MAD2L1BPQ15013 274 aaPredicted RBP9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 CNN3Q15417 329 aaKnown RBP9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 CRTC2Q53ET0 693 aaPredicted RBP9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 TMEM196Q5HYL7 178 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 CLEC12AQ5QGZ9 265 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 MORN4Q8NDC4 146 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 OR7G3Q8NG95 312 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 ACTR6Q9GZN1 396 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 GPR171O14626 319 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 LATO43561 262 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 CFL1P23528 166 aaKnown RBP9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 ECHS1P30084 290 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 OR1D5P58170 312 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 C17orf67Q0P5P2 114 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 MBTPS1Q14703 1052 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 PRAMEF8Q5VWM4 474 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 PRAMEF7Q5VXH5 474 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 P2RY8Q86VZ1 359 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 KCNA7Q96RP8 456 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 STOML2Q9UJZ1 356 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 MYH9P35579 1960 aaKnown RBP9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 EIF1AYO14602 144 aaKnown RBP9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 TNFSF15O95150 251 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 IFNA21P01568 189 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 RETP07949 1114 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 BMP1P13497 986 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 PCGF2P35227 344 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 SLC9A3P48764 834 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 TPTEP56180 551 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 CRYZQ08257 329 aaKnown RBP9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 ANKDD1AQ495B1 522 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 ULK3Q6PHR2 472 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 ZNF627Q7L945 461 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 SARAFQ96BY9 339 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 KAT8Q9H7Z6 458 aaKnown RBP9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 FAM86C1Q9NVL1 165 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 SHOX2O60902 331 aaPredicted RBP9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 CTNSO60931 367 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 SLC35E2P0CK97 266 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 ETS2P15036 469 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 SELEP16581 610 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 BLMHQ13867 455 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 KIAA1614Q5VZ46 1190 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 GPR139Q6DWJ6 353 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 ISCA2Q86U28 154 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 WDR5BQ86VZ2 330 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 METTL4Q8N3J2 472 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 NEDD4LQ96PU5 975 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 FOXQ1Q9C009 403 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 OR10A5Q9H207 317 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 OR10A2Q9H208 303 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 PCDHGA6Q9Y5G7 932 aa9.19□□□□□ -0.94
TNFRSF9-204ENST00000615230 OR6C65A6NJZ3 312 aa9.18□□□□□ -0.94
TNFRSF9-204ENST00000615230 ZNF878C9JN71 531 aa9.18□□□□□ -0.94
TNFRSF9-204ENST00000615230 H3BML4 177 aa9.18□□□□□ -0.94
TNFRSF9-204ENST00000615230 ANXA3P12429 323 aa9.18□□□□□ -0.94
TNFRSF9-204ENST00000615230 CCR7P32248 378 aa9.18□□□□□ -0.94
TNFRSF9-204ENST00000615230 DCTP40126 519 aa9.18□□□□□ -0.94
TNFRSF9-204ENST00000615230 EIF2S3P41091 472 aaKnown RBP9.18□□□□□ -0.94
TNFRSF9-204ENST00000615230 EIF1AXP47813 144 aaKnown RBP9.18□□□□□ -0.94
TNFRSF9-204ENST00000615230 ZXDAP98168 799 aa9.18□□□□□ -0.94
TNFRSF9-204ENST00000615230 ST3GAL4Q11206 333 aa9.18□□□□□ -0.94
TNFRSF9-204ENST00000615230 CTSL3PQ5NE16 218 aa9.18□□□□□ -0.94
TNFRSF9-204ENST00000615230 TMEM211Q6ICI0 200 aa9.18□□□□□ -0.94
TNFRSF9-204ENST00000615230 SHQ1Q6PI26 577 aaKnown RBP9.18□□□□□ -0.94
TNFRSF9-204ENST00000615230 ANKK1Q8NFD2 765 aa9.18□□□□□ -0.94
TNFRSF9-204ENST00000615230 GOT1L1Q8NHS2 421 aaPredicted RBP9.18□□□□□ -0.94
TNFRSF9-204ENST00000615230 NEIL2Q969S2 332 aa9.18□□□□□ -0.94
TNFRSF9-204ENST00000615230 CIB1Q99828 191 aa9.18□□□□□ -0.94
TNFRSF9-204ENST00000615230 CD248Q9HCU0 757 aa9.18□□□□□ -0.94
TNFRSF9-204ENST00000615230 MEPEQ9NQ76 525 aaPredicted RBP9.18□□□□□ -0.94
TNFRSF9-204ENST00000615230 MBD2Q9UBB5 411 aa9.18□□□□□ -0.94
TNFRSF9-204ENST00000615230 HSPE1-MOB4S4R3N1 261 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms