RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 EMC4Q5J8M3 183 aa19.28■□□□□ 0.68
PNKP-209ENST00000596726 ATG16L1Q676U5 607 aa19.28■□□□□ 0.68
PNKP-209ENST00000596726 TIGD3Q6B0B8 471 aa19.28■□□□□ 0.68
PNKP-209ENST00000596726 LARP4Q71RC2 724 aaKnown RBP eCLIP19.28■□□□□ 0.68
PNKP-209ENST00000596726 MAMDC2Q7Z304 686 aaPredicted RBP19.28■□□□□ 0.68
PNKP-209ENST00000596726 HDXQ7Z353 690 aa19.28■□□□□ 0.68
PNKP-209ENST00000596726 WDR53Q7Z5U6 358 aaPredicted RBP19.28■□□□□ 0.68
PNKP-209ENST00000596726 CAMKMTQ7Z624 323 aa19.28■□□□□ 0.68
PNKP-209ENST00000596726 CEP70Q8NHQ1 597 aa19.28■□□□□ 0.68
PNKP-209ENST00000596726 ATP6V1G3Q96LB4 118 aa19.28■□□□□ 0.68
PNKP-209ENST00000596726 GNRHR2Q96P88 292 aa19.28■□□□□ 0.68
PNKP-209ENST00000596726 DMRTA2Q96SC8 542 aa19.28■□□□□ 0.68
PNKP-209ENST00000596726 PRPF18Q99633 342 aaKnown RBP19.28■□□□□ 0.68
PNKP-209ENST00000596726 SH3GL2Q99962 352 aa19.28■□□□□ 0.68
PNKP-209ENST00000596726 VKORC1Q9BQB6 163 aa19.28■□□□□ 0.68
PNKP-209ENST00000596726 OSBPL11Q9BXB4 747 aa19.28■□□□□ 0.68
PNKP-209ENST00000596726 ATAD3AQ9NVI7 634 aa19.28■□□□□ 0.68
PNKP-209ENST00000596726 ARGLU1Q9NWB6 273 aaPredicted RBP19.28■□□□□ 0.68
PNKP-209ENST00000596726 B4GALT7Q9UBV7 327 aa19.28■□□□□ 0.68
PNKP-209ENST00000596726 C15orf41Q9Y2V0 281 aa19.28■□□□□ 0.68
PNKP-209ENST00000596726 OR10H1Q9Y4A9 318 aa19.28■□□□□ 0.68
PNKP-209ENST00000596726 A0A1W2PRB8 838 aa19.27■□□□□ 0.68
PNKP-209ENST00000596726 PRAMEF25A6NGN4 478 aa19.27■□□□□ 0.68
PNKP-209ENST00000596726 KLF11O14901 512 aa19.27■□□□□ 0.68
PNKP-209ENST00000596726 EMC8O43402 210 aa19.27■□□□□ 0.68
PNKP-209ENST00000596726 ESRRAP11474 423 aaPredicted RBP19.27■□□□□ 0.68
PNKP-209ENST00000596726 ENDOUP21128 410 aaKnown RBP19.27■□□□□ 0.68
PNKP-209ENST00000596726 ELAVL4P26378 380 aaKnown RBP19.27■□□□□ 0.68
PNKP-209ENST00000596726 GDF1P27539 372 aa19.27■□□□□ 0.68
PNKP-209ENST00000596726 IL12BP29460 328 aa19.27■□□□□ 0.68
PNKP-209ENST00000596726 KRT20P35900 424 aa19.27■□□□□ 0.68
PNKP-209ENST00000596726 MASP1P48740 699 aa19.27■□□□□ 0.68
PNKP-209ENST00000596726 MAN2A2P49641 1150 aa19.27■□□□□ 0.68
PNKP-209ENST00000596726 ZNHIT3Q15649 155 aaPredicted RBP19.27■□□□□ 0.68
PNKP-209ENST00000596726 TTMPQ5BVD1 217 aa19.27■□□□□ 0.68
PNKP-209ENST00000596726 RPTNQ6XPR3 784 aa19.27■□□□□ 0.68
PNKP-209ENST00000596726 NUP43Q8NFH3 380 aa19.27■□□□□ 0.68
PNKP-209ENST00000596726 PSMA8Q8TAA3 256 aa19.27■□□□□ 0.68
PNKP-209ENST00000596726 PHF10Q8WUB8 498 aaKnown RBP19.27■□□□□ 0.68
PNKP-209ENST00000596726 OR5P2Q8WZ92 322 aa19.27■□□□□ 0.68
PNKP-209ENST00000596726 EFHD2Q96C19 240 aaPredicted RBP19.27■□□□□ 0.68
PNKP-209ENST00000596726 BHLHE41Q9C0J9 482 aaPredicted RBP19.27■□□□□ 0.68
PNKP-209ENST00000596726 LDAHQ9H6V9 325 aa19.27■□□□□ 0.68
PNKP-209ENST00000596726 VIPAS39Q9H9C1 493 aa19.27■□□□□ 0.68
PNKP-209ENST00000596726 C3orf14Q9HBI5 128 aa19.27■□□□□ 0.68
PNKP-209ENST00000596726 GALNT9Q9HCQ5 603 aa19.27■□□□□ 0.68
PNKP-209ENST00000596726 CBLCQ9ULV8 474 aa19.27■□□□□ 0.68
PNKP-209ENST00000596726 MAPRE3Q9UPY8 281 aa19.27■□□□□ 0.68
PNKP-209ENST00000596726 NPIPA2E9PIF3 369 aa19.26■□□□□ 0.67
PNKP-209ENST00000596726 NPIPA3F8WFD2 350 aa19.26■□□□□ 0.67
PNKP-209ENST00000596726 SDHDO14521 159 aa19.26■□□□□ 0.67
PNKP-209ENST00000596726 GNB5O14775 395 aa19.26■□□□□ 0.67
PNKP-209ENST00000596726 BCKDKO14874 412 aa19.26■□□□□ 0.67
PNKP-209ENST00000596726 SNPHO15079 494 aa19.26■□□□□ 0.67
PNKP-209ENST00000596726 NKX2-2O95096 273 aa19.26■□□□□ 0.67
PNKP-209ENST00000596726 HPNP05981 417 aa19.26■□□□□ 0.67
PNKP-209ENST00000596726 CYP4B1P13584 511 aa19.26■□□□□ 0.67
PNKP-209ENST00000596726 LBPP18428 481 aa19.26■□□□□ 0.67
PNKP-209ENST00000596726 PTPN6P29350 595 aa19.26■□□□□ 0.67
PNKP-209ENST00000596726 GAS1P54826 345 aa19.26■□□□□ 0.67
PNKP-209ENST00000596726 GXYLT1Q4G148 440 aa19.26■□□□□ 0.67
PNKP-209ENST00000596726 EXOSC6Q5RKV6 272 aaKnown RBP19.26■□□□□ 0.67
PNKP-209ENST00000596726 OGFOD2Q6N063 350 aa19.26■□□□□ 0.67
PNKP-209ENST00000596726 ANGPTL8Q6UXH0 198 aa19.26■□□□□ 0.67
PNKP-209ENST00000596726 C3P1Q6ZMU1 363 aa19.26■□□□□ 0.67
PNKP-209ENST00000596726 EID3Q8N140 333 aa19.26■□□□□ 0.67
PNKP-209ENST00000596726 ZNF808Q8N4W9 903 aaPredicted RBP19.26■□□□□ 0.67
PNKP-209ENST00000596726 CDRT4Q8N9R6 151 aa19.26■□□□□ 0.67
PNKP-209ENST00000596726 OR1J4Q8NGS1 313 aa19.26■□□□□ 0.67
PNKP-209ENST00000596726 NEIL3Q8TAT5 605 aa19.26■□□□□ 0.67
PNKP-209ENST00000596726 FAM120BQ96EK7 910 aaKnown RBP19.26■□□□□ 0.67
PNKP-209ENST00000596726 MS4A4EQ96PG1 132 aa19.26■□□□□ 0.67
PNKP-209ENST00000596726 SLC6A15Q9H2J7 730 aa19.26■□□□□ 0.67
PNKP-209ENST00000596726 Q9N2J8 555 aa19.26■□□□□ 0.67
PNKP-209ENST00000596726 KLRF1Q9NZS2 232 aa19.26■□□□□ 0.67
PNKP-209ENST00000596726 SPRR3Q9UBC9 169 aa19.26■□□□□ 0.67
PNKP-209ENST00000596726 C2orf72A6NCS6 295 aa19.25■□□□□ 0.67
PNKP-209ENST00000596726 ANKRD28O15084 1053 aa19.25■□□□□ 0.67
PNKP-209ENST00000596726 HDAC3O15379 428 aa19.25■□□□□ 0.67
PNKP-209ENST00000596726 IL33O95760 270 aa19.25■□□□□ 0.67
PNKP-209ENST00000596726 GABRA3P34903 492 aa19.25■□□□□ 0.67
PNKP-209ENST00000596726 PRKAG1P54619 331 aa19.25■□□□□ 0.67
PNKP-209ENST00000596726 MRPS22P82650 360 aaKnown RBP19.25■□□□□ 0.67
PNKP-209ENST00000596726 DECR1Q16698 335 aa19.25■□□□□ 0.67
PNKP-209ENST00000596726 ZCCHC12Q6PEW1 402 aa19.25■□□□□ 0.67
PNKP-209ENST00000596726 NCCRP1Q6ZVX7 275 aaPredicted RBP19.25■□□□□ 0.67
PNKP-209ENST00000596726 MRGPRGQ86SM5 289 aa19.25■□□□□ 0.67
PNKP-209ENST00000596726 WDR75Q8IWA0 830 aaKnown RBP19.25■□□□□ 0.67
PNKP-209ENST00000596726 WDSUB1Q8N9V3 476 aa19.25■□□□□ 0.67
PNKP-209ENST00000596726 ZNF75CPQ92670 426 aaPredicted RBP19.25■□□□□ 0.67
PNKP-209ENST00000596726 SARAFQ96BY9 339 aa19.25■□□□□ 0.67
PNKP-209ENST00000596726 DUSP26Q9BV47 211 aa19.25■□□□□ 0.67
PNKP-209ENST00000596726 TP63Q9H3D4 680 aaPredicted RBP19.25■□□□□ 0.67
PNKP-209ENST00000596726 EQTNQ9NQ60 294 aa19.25■□□□□ 0.67
PNKP-209ENST00000596726 PNPLA3Q9NST1 481 aa19.25■□□□□ 0.67
PNKP-209ENST00000596726 PCNX3Q9H6A9 2034 aa19.24■□□□□ 0.67
PNKP-209ENST00000596726 GXYLT2A0PJZ3 443 aa19.24■□□□□ 0.67
PNKP-209ENST00000596726 SLCO1B7G3V0H7 640 aa19.24■□□□□ 0.67
PNKP-209ENST00000596726 AGAP20933 346 aa19.24■□□□□ 0.67
PNKP-209ENST00000596726 LSM12Q3MHD2 195 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms