RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 DPP4P27487 766 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 SRD5A2P31213 254 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 GCKP35557 465 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 CPOXP36551 454 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 PEX19P40855 299 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 RFX3P48380 749 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 KRT6CP48668 564 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 GAS1P54826 345 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 CLDN18P56856 261 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 B3GALT5-AS1P59052 145 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 DCAF7P61962 342 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 TRA2BP62995 288 aaKnown RBP8.09□□□□□ -1.11
GGA3-207ENST00000578896 SIRPAP78324 504 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 FAM27E3Q08E93 113 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 C2orf80Q0P641 193 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 ZNF155Q12901 538 aaPredicted RBP8.09□□□□□ -1.11
GGA3-207ENST00000578896 SNTA1Q13424 505 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 RASA2Q15283 850 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 SF3B4Q15427 424 aaKnown RBP eCLIP8.09□□□□□ -1.117e-6■■■■□ 19.9
GGA3-207ENST00000578896 WHAMMP3Q1A5X7 153 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 DEFB113Q30KQ7 82 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 TMEM81Q6P7N7 255 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 VWA1Q6PCB0 445 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 ENPP6Q6UWR7 440 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 ADGRE4PQ86SQ3 457 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 GRAMD2AQ8IUY3 354 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 CCNYL1Q8N7R7 359 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 OR4K17Q8NGC6 315 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 ZNF675Q8TD23 568 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 FIG4Q92562 907 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 WNT2BQ93097 391 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 TMCO6Q96DC7 493 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 MTBPQ96DY7 904 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 SLC35A4Q96G79 324 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 BTBD9Q96Q07 612 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 SHCBP1LQ9BZQ2 653 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 OPN3Q9H1Y3 402 aaPredicted RBP8.09□□□□□ -1.11
GGA3-207ENST00000578896 DSN1Q9H410 356 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 SLC35C2Q9NQQ7 365 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 DLL4Q9NR61 685 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 NMRK1Q9NWW6 199 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 MED11Q9P086 117 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 C6orf203Q9P0P8 240 aaPredicted RBP8.09□□□□□ -1.11
GGA3-207ENST00000578896 CLCF1Q9UBD9 225 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 ZNF180Q9UJW8 692 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 NFU1Q9UMS0 254 aa8.09□□□□□ -1.11
GGA3-207ENST00000578896 POLR3HQ9Y535 204 aaPredicted RBP8.09□□□□□ -1.11
GGA3-207ENST00000578896 ANK3Q12955 4377 aaKnown RBP8.09□□□□□ -1.11
GGA3-207ENST00000578896 RTTNQ86VV8 2226 aa8.09□□□□□ -1.12
GGA3-207ENST00000578896 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 A0A1W2PNV4 684 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 UBFD1O14562 309 aaKnown RBP8.08□□□□□ -1.12
GGA3-207ENST00000578896 SIAH2O43255 324 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 SEC14L5O43304 696 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 TNFSF13O75888 250 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 ANXA4P09525 319 aaPredicted RBP8.08□□□□□ -1.12
GGA3-207ENST00000578896 PYGBP11216 843 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 DRD2P14416 443 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 ZNF708P17019 499 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 HK1P19367 917 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 CD53P19397 219 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 TAC1P20366 129 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 IMPDH1P20839 514 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 ATP5F1P24539 256 aaPredicted RBP8.08□□□□□ -1.12
GGA3-207ENST00000578896 IL12BP29460 328 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 TIA1P31483 386 aaKnown RBP eCLIP8.08□□□□□ -1.12
GGA3-207ENST00000578896 KRT20P35900 424 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 MC3RP41968 323 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 NCBP2P52298 156 aaKnown RBP eCLIP8.08□□□□□ -1.12
GGA3-207ENST00000578896 SUCLG1P53597 346 aaKnown RBP8.08□□□□□ -1.12
GGA3-207ENST00000578896 PRKAA2P54646 552 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 CLDN15P56746 228 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 SORDQ00796 357 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 ACSM2AQ08AH3 577 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 CSTF3Q12996 717 aaKnown RBP8.08□□□□□ -1.12
GGA3-207ENST00000578896 GAB1Q13480 694 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 EFR3AQ14156 821 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 ERCC6LQ2NKX8 1250 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 SPDYAQ5MJ70 313 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 C10orf62Q5T681 223 aaPredicted RBP8.08□□□□□ -1.12
GGA3-207ENST00000578896 ACSM2BQ68CK6 577 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 TMEM107Q6UX40 140 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 TIFABQ6ZNK6 161 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 P4HA3Q7Z4N8 544 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 KRTAP1-3Q8IUG1 177 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 FAM9CQ8IZT9 166 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 CNEP1R1Q8N9A8 125 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 SMPDL3BQ92485 455 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 MBD6Q96DN6 1003 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 ALPK1Q96QP1 1244 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 BBS4Q96RK4 519 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 ZNF382Q96SR6 550 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 TM9SF2Q99805 663 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 SFXN3Q9BWM7 321 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 C12orf65Q9H3J6 166 aaKnown RBP8.08□□□□□ -1.12
GGA3-207ENST00000578896 TNFRSF12AQ9NP84 129 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 MID1IP1Q9NPA3 183 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 RYDENQ9NUL5 291 aaKnown RBP8.08□□□□□ -1.12
GGA3-207ENST00000578896 KLHL28Q9NXS3 571 aa8.08□□□□□ -1.12
GGA3-207ENST00000578896 SENP1Q9P0U3 644 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms