RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 CYP4B1P13584 511 aa25.36■■□□□ 1.65
SCARF1-207ENST00000573867 GDF1P27539 372 aa25.36■■□□□ 1.65
SCARF1-207ENST00000573867 MASP1P48740 699 aa25.36■■□□□ 1.65
SCARF1-207ENST00000573867 PRKAG1P54619 331 aa25.36■■□□□ 1.65
SCARF1-207ENST00000573867 ANGPTL8Q6UXH0 198 aa25.36■■□□□ 1.65
SCARF1-207ENST00000573867 PACS2Q86VP3 889 aa25.36■■□□□ 1.65
SCARF1-207ENST00000573867 KIRREL3Q8IZU9 778 aa25.36■■□□□ 1.65
SCARF1-207ENST00000573867 NUP43Q8NFH3 380 aa25.36■■□□□ 1.65
SCARF1-207ENST00000573867 QPCTLQ9NXS2 382 aa25.36■■□□□ 1.65
SCARF1-207ENST00000573867 SUCOQ9UBS9 1254 aaKnown RBP25.36■■□□□ 1.65
SCARF1-207ENST00000573867 TRGV5A0A0B4J1U4 118 aa25.35■■□□□ 1.65
SCARF1-207ENST00000573867 A0A1W2PRB8 838 aa25.35■■□□□ 1.65
SCARF1-207ENST00000573867 C17orf51A8MQB3 221 aa25.35■■□□□ 1.65
SCARF1-207ENST00000573867 B4DXG7 233 aa25.35■■□□□ 1.65
SCARF1-207ENST00000573867 AQP7O14520 342 aa25.35■■□□□ 1.65
SCARF1-207ENST00000573867 ANKRD28O15084 1053 aa25.35■■□□□ 1.65
SCARF1-207ENST00000573867 SUSD5O60279 629 aa25.35■■□□□ 1.65
SCARF1-207ENST00000573867 ABCB7O75027 752 aa25.35■■□□□ 1.65
SCARF1-207ENST00000573867 ALDOCP09972 364 aaKnown RBP25.35■■□□□ 1.65
SCARF1-207ENST00000573867 KITP10721 976 aa25.35■■□□□ 1.65
SCARF1-207ENST00000573867 ACP2P11117 423 aa25.35■■□□□ 1.65
SCARF1-207ENST00000573867 PTPN6P29350 595 aa25.35■■□□□ 1.65
SCARF1-207ENST00000573867 IL12BP29460 328 aa25.35■■□□□ 1.65
SCARF1-207ENST00000573867 TRPC1P48995 793 aa25.35■■□□□ 1.65
SCARF1-207ENST00000573867 PNLIPRP2P54317 469 aa25.35■■□□□ 1.65
SCARF1-207ENST00000573867 CYP27C1Q4G0S4 372 aa25.35■■□□□ 1.65
SCARF1-207ENST00000573867 ATG16L1Q676U5 607 aa25.35■■□□□ 1.65
SCARF1-207ENST00000573867 TIGD3Q6B0B8 471 aa25.35■■□□□ 1.65
SCARF1-207ENST00000573867 SLC30A6Q6NXT4 461 aa25.35■■□□□ 1.65
SCARF1-207ENST00000573867 MAMDC2Q7Z304 686 aaPredicted RBP25.35■■□□□ 1.65
SCARF1-207ENST00000573867 HDXQ7Z353 690 aa25.35■■□□□ 1.65
SCARF1-207ENST00000573867 WDR75Q8IWA0 830 aaKnown RBP25.35■■□□□ 1.65
SCARF1-207ENST00000573867 RPRMLQ8N4K4 120 aa25.35■■□□□ 1.65
SCARF1-207ENST00000573867 FBXO30Q8TB52 745 aa25.35■■□□□ 1.65
SCARF1-207ENST00000573867 FAM120BQ96EK7 910 aaKnown RBP25.35■■□□□ 1.65
SCARF1-207ENST00000573867 CXorf36Q9H7Y0 433 aa25.35■■□□□ 1.65
SCARF1-207ENST00000573867 ACKR4Q9NPB9 350 aa25.35■■□□□ 1.65
SCARF1-207ENST00000573867 PNPLA3Q9NST1 481 aa25.35■■□□□ 1.65
SCARF1-207ENST00000573867 KLRF1Q9NZS2 232 aa25.35■■□□□ 1.65
SCARF1-207ENST00000573867 CBLCQ9ULV8 474 aa25.35■■□□□ 1.65
SCARF1-207ENST00000573867 NBPF19A0A087WUL8 3843 aa25.34■■□□□ 1.65
SCARF1-207ENST00000573867 SNPHO15079 494 aa25.34■■□□□ 1.65
SCARF1-207ENST00000573867 EMC8O43402 210 aa25.34■■□□□ 1.65
SCARF1-207ENST00000573867 HCN1O60741 890 aa25.34■■□□□ 1.65
SCARF1-207ENST00000573867 C6orf47O95873 294 aa25.34■■□□□ 1.65
SCARF1-207ENST00000573867 IGKV1D-16P01601 117 aa25.34■■□□□ 1.65
SCARF1-207ENST00000573867 COL8A1P27658 744 aa25.34■■□□□ 1.65
SCARF1-207ENST00000573867 GABRA3P34903 492 aa25.34■■□□□ 1.65
SCARF1-207ENST00000573867 MAN2A2P49641 1150 aa25.34■■□□□ 1.65
SCARF1-207ENST00000573867 GAS1P54826 345 aa25.34■■□□□ 1.65
SCARF1-207ENST00000573867 PSPHP78330 225 aa25.34■■□□□ 1.65
SCARF1-207ENST00000573867 SNTA1Q13424 505 aa25.34■■□□□ 1.65
SCARF1-207ENST00000573867 EFR3AQ14156 821 aa25.34■■□□□ 1.65
SCARF1-207ENST00000573867 EXOSC6Q5RKV6 272 aaKnown RBP25.34■■□□□ 1.65
SCARF1-207ENST00000573867 SZRD1Q7Z422 152 aa25.34■■□□□ 1.65
SCARF1-207ENST00000573867 MAVSQ7Z434 540 aa25.34■■□□□ 1.65
SCARF1-207ENST00000573867 CAMKMTQ7Z624 323 aa25.34■■□□□ 1.65
SCARF1-207ENST00000573867 MARVELD2Q8N4S9 558 aa25.34■■□□□ 1.65
SCARF1-207ENST00000573867 WDSUB1Q8N9V3 476 aa25.34■■□□□ 1.65
SCARF1-207ENST00000573867 OR5M9Q8NGP3 310 aa25.34■■□□□ 1.65
SCARF1-207ENST00000573867 OR5P2Q8WZ92 322 aa25.34■■□□□ 1.65
SCARF1-207ENST00000573867 PIK3R3Q92569 461 aa25.34■■□□□ 1.65
SCARF1-207ENST00000573867 ZNF75CPQ92670 426 aaPredicted RBP25.34■■□□□ 1.65
SCARF1-207ENST00000573867 TMCO6Q96DC7 493 aa25.34■■□□□ 1.65
SCARF1-207ENST00000573867 C16orf58Q96GQ5 468 aa25.34■■□□□ 1.65
SCARF1-207ENST00000573867 LDAHQ9H6V9 325 aa25.34■■□□□ 1.65
SCARF1-207ENST00000573867 WDR55Q9H6Y2 383 aaPredicted RBP25.34■■□□□ 1.65
SCARF1-207ENST00000573867 Q9N2J8 555 aa25.34■■□□□ 1.65
SCARF1-207ENST00000573867 B4GALT7Q9UBV7 327 aa25.34■■□□□ 1.65
SCARF1-207ENST00000573867 E9PLN8 166 aa25.33■■□□□ 1.65
SCARF1-207ENST00000573867 HDAC3O15379 428 aa25.33■■□□□ 1.65
SCARF1-207ENST00000573867 SASH3O75995 380 aa25.33■■□□□ 1.65
SCARF1-207ENST00000573867 NKX2-2O95096 273 aa25.33■■□□□ 1.65
SCARF1-207ENST00000573867 ESRRAP11474 423 aaPredicted RBP25.33■■□□□ 1.65
SCARF1-207ENST00000573867 LBPP18428 481 aa25.33■■□□□ 1.65
SCARF1-207ENST00000573867 KRT20P35900 424 aa25.33■■□□□ 1.65
SCARF1-207ENST00000573867 WNT3P56703 355 aa25.33■■□□□ 1.65
SCARF1-207ENST00000573867 CDSNQ15517 529 aa25.33■■□□□ 1.65
SCARF1-207ENST00000573867 GXYLT1Q4G148 440 aa25.33■■□□□ 1.65
SCARF1-207ENST00000573867 MFSD12Q6NUT3 480 aa25.33■■□□□ 1.65
SCARF1-207ENST00000573867 TRIM42Q8IWZ5 723 aa25.33■■□□□ 1.65
SCARF1-207ENST00000573867 PSMA8Q8TAA3 256 aa25.33■■□□□ 1.65
SCARF1-207ENST00000573867 OTUB1Q96FW1 271 aaPredicted RBP25.33■■□□□ 1.65
SCARF1-207ENST00000573867 MS4A4EQ96PG1 132 aa25.33■■□□□ 1.65
SCARF1-207ENST00000573867 VKORC1Q9BQB6 163 aa25.33■■□□□ 1.65
SCARF1-207ENST00000573867 DUSP26Q9BV47 211 aa25.33■■□□□ 1.65
SCARF1-207ENST00000573867 BHLHE41Q9C0J9 482 aaPredicted RBP25.33■■□□□ 1.65
SCARF1-207ENST00000573867 VIPAS39Q9H9C1 493 aa25.33■■□□□ 1.65
SCARF1-207ENST00000573867 ATAD3AQ9NVI7 634 aa25.33■■□□□ 1.65
SCARF1-207ENST00000573867 ARGLU1Q9NWB6 273 aaPredicted RBP25.33■■□□□ 1.65
SCARF1-207ENST00000573867 MAPRE3Q9UPY8 281 aa25.33■■□□□ 1.65
SCARF1-207ENST00000573867 DNAJC13O75165 2243 aa25.32■■□□□ 1.64
SCARF1-207ENST00000573867 OR14I1A6ND48 311 aa25.32■■□□□ 1.64
SCARF1-207ENST00000573867 KLF11O14901 512 aa25.32■■□□□ 1.64
SCARF1-207ENST00000573867 IL33O95760 270 aa25.32■■□□□ 1.64
SCARF1-207ENST00000573867 HPNP05981 417 aa25.32■■□□□ 1.64
SCARF1-207ENST00000573867 DDX5P17844 614 aaKnown RBP25.32■■□□□ 1.64
SCARF1-207ENST00000573867 EPHA3P29320 983 aa25.32■■□□□ 1.64
SCARF1-207ENST00000573867 ZNHIT3Q15649 155 aaPredicted RBP25.32■■□□□ 1.64
SCARF1-207ENST00000573867 OR4F3Q6IEY1 312 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms