RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 C12orf60Q5U649 245 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 ZNF600Q6ZNG1 722 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 GPBP1Q86WP2 473 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 HIPK1Q86Z02 1210 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 PRR22Q8IZ63 422 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 ARL14Q8N4G2 192 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 CERS5Q8N5B7 392 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 BCORP1Q8N888 145 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 NFAM1Q8NET5 270 aaPredicted RBP2.19□□□□□ -2.06
SCFD1-218ENST00000556256 UBE2Q2Q8WVN8 375 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 MCHR2Q969V1 340 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 ADIPOR1Q96A54 375 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 RAB3CQ96E17 227 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 NUS1Q96E22 293 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 PIWIL1Q96J94 861 aaKnown RBP2.19□□□□□ -2.06
SCFD1-218ENST00000556256 TSPAN18Q96SJ8 248 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 APOOQ9BUR5 198 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 KRT23Q9C075 422 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 ELL3Q9HB65 397 aaPredicted RBP2.19□□□□□ -2.06
SCFD1-218ENST00000556256 ESM1Q9NQ30 184 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 DHRS4-AS1Q9P1J3 65 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 ACTR3BQ9P1U1 418 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 P2RX2Q9UBL9 471 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 FZR1Q9UM11 496 aa2.19□□□□□ -2.06
SCFD1-218ENST00000556256 NCAPD2Q15021 1401 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 MFSD2BA6NFX1 497 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 F8WDY8 70 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 H3BMH7 237 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 K7ERI5 159 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 ALOX15BO15296 676 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 CFLARO15519 480 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 LANCL1O43813 399 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 TYROBPO43914 113 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 STAM2O75886 525 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 TRIM16O95361 564 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 NUDT14O95848 222 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 GSTA1P08263 222 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 HSD17B1P14061 328 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 ARF4P18085 180 aaPredicted RBP2.18□□□□□ -2.06
SCFD1-218ENST00000556256 CHRNA3P32297 505 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 RFC2P35250 354 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 ARHGDIAP52565 204 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 SLC7A2P52569 658 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 HERVK_113P63132 956 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 ERVK-8P63133 956 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 GSTO1P78417 241 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 MRPS6P82932 125 aaKnown RBP2.18□□□□□ -2.06
SCFD1-218ENST00000556256 RUNX3Q13761 415 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 ABRAXAS2Q15018 415 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 Q1RN00 199 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 MS4A13Q5J8X5 152 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 RAET1GQ6H3X3 334 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 PRR5LQ6MZQ0 368 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 IRGCQ6NXR0 463 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 APOOLQ6UXV4 268 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 ZNF562Q6V9R5 426 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 HACD2Q6Y1H2 254 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 PRSS48Q7RTY5 328 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 NET1Q7Z628 596 aaPredicted RBP2.18□□□□□ -2.06
SCFD1-218ENST00000556256 VPS36Q86VN1 386 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 OR52B4Q8NGK2 314 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 ERVK-6Q9BXR3 956 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 CCSER1Q9C0I3 900 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 NACA2Q9H009 215 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 RAB17Q9H0T7 212 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 RNF41Q9H4P4 317 aaPredicted RBP2.18□□□□□ -2.06
SCFD1-218ENST00000556256 ECT2Q9H8V3 914 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 ROPN1Q9HAT0 212 aaPredicted RBP2.18□□□□□ -2.06
SCFD1-218ENST00000556256 NGBQ9NPG2 151 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 FAM114A2Q9NRY5 505 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 RAI14Q9P0K7 980 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 ARMCX1Q9P291 453 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 HOOK1Q9UJC3 728 aaKnown RBP2.18□□□□□ -2.06
SCFD1-218ENST00000556256 FOXJ3Q9UPW0 622 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 SLC9A8Q9Y2E8 581 aa2.18□□□□□ -2.06
SCFD1-218ENST00000556256 TRAV9-2A0A087WT02 112 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 H0YL77 283 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 H3BTX0 84 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 TM9SF1O15321 606 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 CHADO15335 359 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 SRPX2O60687 465 aaPredicted RBP2.17□□□□□ -2.06
SCFD1-218ENST00000556256 RAMP1O60894 148 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 SDC3O75056 442 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 APBB3O95704 486 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 PIGRP01833 764 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 SLC35G4P0C7Q5 338 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 PVRP15151 417 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 BRCC3P46736 316 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 OR1D4P47884 311 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 STK19P49842 368 aaPredicted RBP2.17□□□□□ -2.06
SCFD1-218ENST00000556256 GPC3P51654 580 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 RAG2P55895 527 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 PPIAP62937 165 aaKnown RBP2.17□□□□□ -2.06
SCFD1-218ENST00000556256 IGLV3-21P80748 117 aaPredicted RBP2.17□□□□□ -2.06
SCFD1-218ENST00000556256 HTD2P86397 168 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 DPYSQ14117 519 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 TGIF1Q15583 401 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 ZIC1Q15915 447 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 CDKN3Q16667 212 aa2.17□□□□□ -2.06
SCFD1-218ENST00000556256 ADPRMQ3LIE5 342 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms